RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 LRP2BPQ9P2M1 347 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 LRRC37AA6NMS7 1700 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 SLX4Q8IY92 1834 aa12.9□□□□□ -0.34
TNFRSF1A-211ENST00000538363 ZAP70P43403 619 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 SLC51AQ86UW1 340 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 FAM84BQ96KN1 310 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 GPR101Q96P66 508 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 FHDC1Q9C0D6 1143 aaPredicted RBP12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ABCF2Q9UG63 623 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 NDUFB9Q9Y6M9 179 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 AK9Q5TCS8 1911 aa12.89□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ARFGEF1Q9Y6D6 1849 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 SEMA3EO15041 775 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 IDH1O75874 414 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ARID4AP29374 1257 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 FXR2P51116 673 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 MAP3K12Q12852 859 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 SPTY2D1Q68D10 685 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 OLFM4Q6UX06 510 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 RAI14Q9P0K7 980 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 POLLQ9UGP5 575 aa12.88□□□□□ -0.35
TNFRSF1A-211ENST00000538363 WTIPA6NIX2 430 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 PPIP5K2O43314 1243 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 MCAMP43121 646 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 MFAP1P55081 439 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 DOK7Q18PE1 504 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 CWC27Q6UX04 472 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 FBXO33Q7Z6M2 555 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 COA1Q9GZY4 146 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 HMG20BQ9P0W2 317 aa12.87□□□□□ -0.35
TNFRSF1A-211ENST00000538363 REC8O95072 547 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ZFYP08048 801 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 KCNA3P22001 575 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 KLRK1P26718 216 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 RASGRF1Q13972 1273 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 TBC1D9Q6ZT07 1266 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ERICH6Q7L0X2 663 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 LARGE2Q8N3Y3 721 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 KBTBD3Q8NAB2 608 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 WDR66Q8TBY9 1149 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 EDC3Q96F86 508 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 NOL10Q9BSC4 688 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 BACH2Q9BYV9 841 aa12.86□□□□□ -0.35
TNFRSF1A-211ENST00000538363 MED23Q9ULK4 1368 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 RNF113AO15541 343 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 CHMLP26374 656 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 SCARF1Q14162 830 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ARHGAP27Q6ZUM4 889 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 C15orf52Q6ZUT6 534 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 TXNRD3Q86VQ6 643 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 CD209Q9NNX6 404 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 JAG2Q9Y219 1238 aa12.85□□□□□ -0.35
TNFRSF1A-211ENST00000538363 MCCP23508 829 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 C8orf34Q49A92 452 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 SLC9C2Q5TAH2 1124 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 DZIP1Q86YF9 867 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 NIM1KQ8IY84 436 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 JDP2Q8WYK2 163 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 TAOK3Q9H2K8 898 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 DBNDD1Q9H9R9 158 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 ARAP2Q8WZ64 1704 aa12.84□□□□□ -0.35
TNFRSF1A-211ENST00000538363 LTBP1Q14766 1721 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 CYP2E1P05181 493 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 LDHBP07195 334 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 GTF2IP78347 998 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 NMIQ13287 307 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 AOC3Q16853 763 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 TDRD7Q8NHU6 1098 aaKnown RBP12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 TBC1D22AQ8WUA7 517 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ANO2Q9NQ90 1003 aa12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ZNF277Q9NRM2 450 aaPredicted RBP12.83□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ECE2O60344 883 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 LDHCP07864 332 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 GSTO1P78417 241 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 GPR162Q16538 588 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MCMDC2Q4G0Z9 681 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 TTLL5Q6EMB2 1281 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 NAA16Q6N069 864 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PODNQ7Z5L7 613 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 TICAM2Q86XR7 235 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MAGEB6Q8N7X4 407 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PSMD1Q99460 953 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 SYT17Q9BSW7 474 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 RTFDC1Q9BY42 306 aaPredicted RBP12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 VPS33BQ9H267 617 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 PIH1D3Q9NQM4 214 aaKnown RBP12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 FER1L6Q2WGJ9 1857 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 CCDC88AQ3V6T2 1871 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 MYH13Q9UKX3 1938 aa12.82□□□□□ -0.36
TNFRSF1A-211ENST00000538363 DUOX1Q9NRD9 1551 aa12.81□□□□□ -0.36
TNFRSF1A-211ENST00000538363 IL1R1P14778 569 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms