RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 ELL2O00472 640 aaPredicted RBP14.39□□□□□ -0.11
CLPB-208ENST00000538021 USP2O75604 605 aaPredicted RBP14.39□□□□□ -0.11
CLPB-208ENST00000538021 IGHMBP2P38935 993 aaKnown RBP14.39□□□□□ -0.11
CLPB-208ENST00000538021 KCNJ4P48050 445 aa14.39□□□□□ -0.11
CLPB-208ENST00000538021 ANKRD13AQ8IZ07 590 aa14.39□□□□□ -0.11
CLPB-208ENST00000538021 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
CLPB-208ENST00000538021 ELP3Q9H9T3 547 aa14.39□□□□□ -0.11
CLPB-208ENST00000538021 TESPA1A2RU30 521 aaPredicted RBP14.38□□□□□ -0.11
CLPB-208ENST00000538021 TAF1CQ15572 869 aaPredicted RBP14.38□□□□□ -0.11
CLPB-208ENST00000538021 CFAP100Q494V2 611 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 SH3TC2Q8TF17 1288 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 DPF3Q92784 378 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 OPTNQ96CV9 577 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 ZFYVE28Q9HCC9 887 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 MBIPQ9NS73 344 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 RBM27Q9P2N5 1060 aaKnown RBP14.38□□□□□ -0.11
CLPB-208ENST00000538021 A0A0C4DFX4 3053 aa14.38□□□□□ -0.11
CLPB-208ENST00000538021 DDX58O95786 925 aaKnown RBP14.37□□□□□ -0.11
CLPB-208ENST00000538021 CERS5Q8N5B7 392 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 ANKRD2Q9GZV1 360 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 CD209Q9NNX6 404 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 MAP3K2Q9Y2U5 619 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 COL6A3P12111 3177 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 LAMB1P07942 1786 aa14.37□□□□□ -0.11
CLPB-208ENST00000538021 CCL15-CCL14A0A0B4J2E2 113 aa14.36□□□□□ -0.11
CLPB-208ENST00000538021 RBM5P52756 815 aaKnown RBP eCLIP14.36□□□□□ -0.11
CLPB-208ENST00000538021 RASA3Q14644 834 aa14.36□□□□□ -0.11
CLPB-208ENST00000538021 CCL15Q16663 113 aa14.36□□□□□ -0.11
CLPB-208ENST00000538021 MTMR14Q8NCE2 650 aa14.36□□□□□ -0.11
CLPB-208ENST00000538021 PRMT6Q96LA8 375 aaPredicted RBP14.36□□□□□ -0.11
CLPB-208ENST00000538021 MPHOSPH8Q99549 860 aa14.36□□□□□ -0.11
CLPB-208ENST00000538021 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 BRI3BPQ8WY22 251 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 RUNDC1Q96C34 613 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 MS4A4AQ96JQ5 239 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 AOX1Q06278 1338 aa14.35□□□□□ -0.11
CLPB-208ENST00000538021 ECM2O94769 699 aaPredicted RBP14.34□□□□□ -0.11
CLPB-208ENST00000538021 IGKV5-2P06315 115 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 KIF22Q14807 665 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 CNKSR2Q8WXI2 1034 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 ARHGAP39Q9C0H5 1083 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 JAG2Q9Y219 1238 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 ECM29Q5VYK3 1845 aa14.34□□□□□ -0.11
CLPB-208ENST00000538021 MYH3P11055 1940 aa14.33□□□□□ -0.11
CLPB-208ENST00000538021 WDHD1O75717 1129 aaPredicted RBP14.33□□□□□ -0.12
CLPB-208ENST00000538021 ITGA6P23229 1130 aa14.33□□□□□ -0.12
CLPB-208ENST00000538021 GTF2A2P52657 109 aa14.33□□□□□ -0.12
CLPB-208ENST00000538021 CHRNDQ07001 517 aa14.33□□□□□ -0.12
CLPB-208ENST00000538021 NEXNQ0ZGT2 675 aa14.33□□□□□ -0.12
CLPB-208ENST00000538021 FAM43AQ8N2R8 423 aa14.33□□□□□ -0.12
CLPB-208ENST00000538021 PI4KAP2A4QPH2 592 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 SNAP23O00161 211 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 MTFR1Q15390 333 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 CWF19L2Q2TBE0 894 aaKnown RBP14.32□□□□□ -0.12
CLPB-208ENST00000538021 KSR2Q6VAB6 950 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 UBE3BQ7Z3V4 1068 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 PI4KAP1Q8N8J0 262 aa14.32□□□□□ -0.12
CLPB-208ENST00000538021 OTOFQ9HC10 1997 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 TAF5LO75529 589 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 TNFAIP1Q13829 316 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 WDR43Q15061 677 aaKnown RBP eCLIP14.31□□□□□ -0.12
CLPB-208ENST00000538021 CCDC30Q5VVM6 783 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.31□□□□□ -0.12
CLPB-208ENST00000538021 SHISA4Q96DD7 197 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 CSADQ9Y600 493 aa14.31□□□□□ -0.12
CLPB-208ENST00000538021 LAMA3Q16787 3333 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 TLR2O60603 784 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 MAP3K9P80192 1104 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 LACTBP83111 547 aaPredicted RBP14.3□□□□□ -0.12
CLPB-208ENST00000538021 VGLL4Q14135 290 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 CDAN1Q8IWY9 1227 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 C8orf58Q8NAV2 365 aa14.3□□□□□ -0.12
CLPB-208ENST00000538021 HELBQ8NG08 1087 aaPredicted RBP14.3□□□□□ -0.12
CLPB-208ENST00000538021 ZSWIM8A7E2V4 1837 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 TCP10L2B9ZVM9 353 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 H7C1W4 665 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 ZNF853P0CG23 659 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 IL1R1P14778 569 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 PRMT2P55345 433 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 RALBP1Q15311 655 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 ZNF804AQ7Z570 1209 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 TDRD3Q9H7E2 651 aaKnown RBP14.29□□□□□ -0.12
CLPB-208ENST00000538021 IFT57Q9NWB7 429 aa14.29□□□□□ -0.12
CLPB-208ENST00000538021 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
CLPB-208ENST00000538021 GNRH1P01148 92 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 FKBP1AP62942 108 aaKnown RBP14.28□□□□□ -0.12
CLPB-208ENST00000538021 GNAI1P63096 354 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 SPDYE2Q495Y8 402 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.28□□□□□ -0.12
CLPB-208ENST00000538021 NKX2-3Q8TAU0 364 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 TMEM39BQ9GZU3 492 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 NR2E3Q9Y5X4 410 aa14.28□□□□□ -0.12
CLPB-208ENST00000538021 IRS2Q9Y4H2 1338 aa14.27□□□□□ -0.12
CLPB-208ENST00000538021 ANKRD18BA2A2Z9 1011 aa14.27□□□□□ -0.13
CLPB-208ENST00000538021 BTBD19C9JJ37 291 aa14.27□□□□□ -0.13
CLPB-208ENST00000538021 CETPP11597 493 aa14.27□□□□□ -0.13
CLPB-208ENST00000538021 C15orf52Q6ZUT6 534 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms