RNA–Protein interactions for RNA: ENST00000537619.6

PTPRR-205, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best)

Gene PTPRR, Length 1,927 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-205ENST00000537619 PUM3Q15397 648 aaKnown RBP11.01□□□□□ -0.65
PTPRR-205ENST00000537619 SMIM5Q71RC9 77 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 PTF1AQ7RTS3 328 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 LINC00116Q8NCU8 138 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 AK7Q96M32 723 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 ELP1O95163 1332 aa11.01□□□□□ -0.65
PTPRR-205ENST00000537619 BCL9LQ86UU0 1499 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 PHF14O94880 888 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 PDE6AP16499 860 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 KCNQ4P56696 695 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 PIP4K2BP78356 416 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 FGD1P98174 961 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 LRRFIP1Q32MZ4 808 aaKnown RBP11□□□□□ -0.65
PTPRR-205ENST00000537619 GIMAP6Q6P9H5 292 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 TBC1D10CQ8IV04 446 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 FBXL16Q8N461 479 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 LEO1Q8WVC0 666 aaPredicted RBP11□□□□□ -0.65
PTPRR-205ENST00000537619 LPIN2Q92539 896 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 TRIM44Q96DX7 344 aaPredicted RBP11□□□□□ -0.65
PTPRR-205ENST00000537619 LLPHQ9BRT6 129 aaKnown RBP11□□□□□ -0.65
PTPRR-205ENST00000537619 MROH5Q6ZUA9 1318 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 ZNF532Q9HCE3 1301 aa11□□□□□ -0.65
PTPRR-205ENST00000537619 IDH1O75874 414 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 ADD1P35611 737 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 EVCP57679 992 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 RASGRF1Q13972 1273 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 IMMTQ16891 758 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 CSPP1Q1MSJ5 1256 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 C3orf67Q6ZVT6 689 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 ZNF274Q96GC6 653 aaPredicted RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 PGBD1Q96JS3 809 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 CTNNA3Q9UI47 895 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 HPS5Q9UPZ3 1129 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 NIP7Q9Y221 180 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 DOCK2Q92608 1830 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 PRC1O43663 620 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 FDPSP14324 419 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 FAM98CQ17RN3 349 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 PARP10Q53GL7 1025 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 FTOQ9C0B1 505 aaKnown RBP eCLIP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.99□□□□□ -0.65
PTPRR-205ENST00000537619 TACC3Q9Y6A5 838 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 RTL9Q8NET4 1388 aa10.99□□□□□ -0.65
PTPRR-205ENST00000537619 UQCRFS1P1P0C7P4 283 aa10.98□□□□□ -0.65
PTPRR-205ENST00000537619 UBE3CQ15386 1083 aa10.98□□□□□ -0.65
PTPRR-205ENST00000537619 ILDR1Q86SU0 546 aaPredicted RBP10.98□□□□□ -0.65
PTPRR-205ENST00000537619 RAB11FIP4Q86YS3 637 aa10.98□□□□□ -0.65
PTPRR-205ENST00000537619 ANP32BQ92688 251 aaKnown RBP10.98□□□□□ -0.65
PTPRR-205ENST00000537619 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPRR-205ENST00000537619 EPB41L4AQ9HCS5 686 aaPredicted RBP10.98□□□□□ -0.65
PTPRR-205ENST00000537619 CARMIL3Q8ND23 1372 aa10.98□□□□□ -0.65
PTPRR-205ENST00000537619 WTIPA6NIX2 430 aaPredicted RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 SLC5A1P13866 664 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 TTF1Q15361 905 aaPredicted RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 NAA16Q6N069 864 aaPredicted RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 CYB5R4Q7L1T6 521 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 FAM184AQ8NB25 1140 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 SPATA5Q8NB90 893 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 SPATA32Q96LK8 384 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 NAP1L2Q9ULW6 460 aaPredicted RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 MYH15Q9Y2K3 1946 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 ZNF831Q5JPB2 1677 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 H3BQV1 296 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 BCAMP50895 628 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 HMGN5P82970 282 aaKnown RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 GUCY1B3Q02153 619 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 CCDC152Q4G0S7 254 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 ZSCAN25Q6NSZ9 544 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 SMARCC1Q92922 1105 aaPredicted RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 STRBPQ96SI9 672 aaKnown RBP10.97□□□□□ -0.65
PTPRR-205ENST00000537619 MPHOSPH8Q99549 860 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 A0A1B0GUL6 1792 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 C4AP0C0L4 1744 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 C4BP0C0L5 1744 aa10.97□□□□□ -0.65
PTPRR-205ENST00000537619 NEDD4P46934 1319 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 KLF18A0A0U1RQI7 1052 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 ZNF213O14771 459 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 LETM1O95202 739 aaPredicted RBP10.96□□□□□ -0.65
PTPRR-205ENST00000537619 MCM5P33992 734 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 CHRNDQ07001 517 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 ERFEQ4G0M1 354 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 ZSCAN30Q86W11 494 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 NCOA7Q8NI08 942 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 SCAND2PQ9GZW5 306 aaPredicted RBP10.96□□□□□ -0.65
PTPRR-205ENST00000537619 BCL2L12Q9HB09 334 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 SENP2Q9HC62 589 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 INCENPQ9NQS7 918 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 SCN7AQ01118 1682 aa10.96□□□□□ -0.65
PTPRR-205ENST00000537619 COL1A1P02452 1464 aaPredicted RBP10.96□□□□□ -0.66
PTPRR-205ENST00000537619 CASZ1Q86V15 1759 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 GOLGA8BA8MQT2 603 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 AP5Z1O43299 807 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 TOM1O60784 492 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 OTUD7BQ6GQQ9 843 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 MAGEB6Q8N7X4 407 aa10.96□□□□□ -0.66
PTPRR-205ENST00000537619 ZSCAN16Q9H4T2 348 aaPredicted RBP10.96□□□□□ -0.66
PTPRR-205ENST00000537619 DACT1Q9NYF0 836 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms