RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 HELBQ8NG08 1087 aaPredicted RBP18.48■□□□□ 0.55
MKS1-204ENST00000537529 ZNF274Q96GC6 653 aaPredicted RBP18.48■□□□□ 0.55
MKS1-204ENST00000537529 ELP1O95163 1332 aa18.48■□□□□ 0.55
MKS1-204ENST00000537529 IDH1O75874 414 aaKnown RBP18.48■□□□□ 0.55
MKS1-204ENST00000537529 CLEC4GQ6UXB4 293 aa18.48■□□□□ 0.55
MKS1-204ENST00000537529 H3BQV1 296 aa18.47■□□□□ 0.55
MKS1-204ENST00000537529 IFFO2Q5TF58 517 aa18.47■□□□□ 0.55
MKS1-204ENST00000537529 NSUN7Q8NE18 718 aaKnown RBP18.47■□□□□ 0.55
MKS1-204ENST00000537529 SEC31BQ9NQW1 1179 aa18.47■□□□□ 0.55
MKS1-204ENST00000537529 MYH14Q7Z406 1995 aaKnown RBP18.47■□□□□ 0.55
MKS1-204ENST00000537529 TCHHQ07283 1943 aa18.47■□□□□ 0.55
MKS1-204ENST00000537529 PDE6AP16499 860 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 HAND2P61296 217 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 NGLY1Q96IV0 654 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 SCAND2PQ9GZW5 306 aaPredicted RBP18.46■□□□□ 0.55
MKS1-204ENST00000537529 PTPDC1A2A3K4 754 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 ZNF213O14771 459 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 MCM5P33992 734 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 RALYLQ86SE5 291 aaKnown RBP18.46■□□□□ 0.55
MKS1-204ENST00000537529 SPATA5Q8NB90 893 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 LINC00116Q8NCU8 138 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 NCOA7Q8NI08 942 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 DDX11Q96FC9 970 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 C8orf37Q96NL8 207 aa18.46■□□□□ 0.55
MKS1-204ENST00000537529 NAP1L2Q9ULW6 460 aaPredicted RBP18.46■□□□□ 0.55
MKS1-204ENST00000537529 WDR19Q8NEZ3 1342 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 ZNF532Q9HCE3 1301 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 PDIA3P30101 505 aaKnown RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 NAA16Q6N069 864 aaPredicted RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 ZSCAN16Q9H4T2 348 aaPredicted RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 RRAGDQ9NQL2 400 aaPredicted RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 BCL9LQ86UU0 1499 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 CNTNAP4Q9C0A0 1308 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 RGL2O15211 777 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 EVCP57679 992 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 RESTQ13127 1097 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 TTC6Q86TZ1 520 aa18.45■□□□□ 0.54
MKS1-204ENST00000537529 MB21D2Q8IYB1 491 aaPredicted RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 CDC5LQ99459 802 aaKnown RBP18.45■□□□□ 0.54
MKS1-204ENST00000537529 PRC1O43663 620 aa18.44■□□□□ 0.54
MKS1-204ENST00000537529 TPRNQ4KMQ1 711 aa18.44■□□□□ 0.54
MKS1-204ENST00000537529 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
MKS1-204ENST00000537529 TCRBV5S4A2TA0A5A2 114 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 UBAP1LF5GYI3 381 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 CTDNEP1O95476 244 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 CCT2P78371 535 aaKnown RBP18.43■□□□□ 0.54
MKS1-204ENST00000537529 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 SPATA32Q96LK8 384 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 RASGRF1Q13972 1273 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 FAM173BQ6P4H8 233 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 AIDAQ96BJ3 306 aa18.43■□□□□ 0.54
MKS1-204ENST00000537529 SALL1Q9NSC2 1324 aa18.42■□□□□ 0.54
MKS1-204ENST00000537529 TRDNQ13061 729 aa18.42■□□□□ 0.54
MKS1-204ENST00000537529 NCOA5Q9HCD5 579 aaKnown RBP18.42■□□□□ 0.54
MKS1-204ENST00000537529 APPP05067 770 aa18.42■□□□□ 0.54
MKS1-204ENST00000537529 RNF214Q8ND24 703 aa18.42■□□□□ 0.54
MKS1-204ENST00000537529 SCN7AQ01118 1682 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 ZMYM6O95789 1325 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 GOLGA6L4A6NEF3 574 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 ESPNB1AK53 854 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 CHRNDQ07001 517 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 LEO1Q8WVC0 666 aaPredicted RBP18.41■□□□□ 0.54
MKS1-204ENST00000537529 PDLIM2Q96JY6 352 aa18.41■□□□□ 0.54
MKS1-204ENST00000537529 DOCK2Q92608 1830 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 DHX16O60231 1041 aaKnown RBP18.4■□□□□ 0.54
MKS1-204ENST00000537529 ANTXR2P58335 489 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 ALX1Q15699 326 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
MKS1-204ENST00000537529 STRBPQ96SI9 672 aaKnown RBP18.4■□□□□ 0.54
MKS1-204ENST00000537529 KLF18A0A0U1RQI7 1052 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 GOLGA8BA8MQT2 603 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 ERFEQ4G0M1 354 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 ANKRD18AQ8IVF6 992 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 MAGEB6Q8N7X4 407 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 TFIP11Q9UBB9 837 aaKnown RBP18.4■□□□□ 0.54
MKS1-204ENST00000537529 CFAP45Q9UL16 551 aa18.4■□□□□ 0.54
MKS1-204ENST00000537529 SNAP23O00161 211 aa18.39■□□□□ 0.53
MKS1-204ENST00000537529 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
MKS1-204ENST00000537529 RC3H1Q5TC82 1133 aaKnown RBP18.39■□□□□ 0.53
MKS1-204ENST00000537529 NBPF3Q9H094 633 aa18.39■□□□□ 0.53
MKS1-204ENST00000537529 GPHNQ9NQX3 736 aaPredicted RBP18.39■□□□□ 0.53
MKS1-204ENST00000537529 CARMIL3Q8ND23 1372 aa18.39■□□□□ 0.53
MKS1-204ENST00000537529 BCAMP50895 628 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 UVSSAQ2YD98 709 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 HS1BP3Q53T59 392 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 TBC1D10CQ8IV04 446 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 MBD4O95243 580 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 CLCN1P35523 988 aa18.38■□□□□ 0.53
MKS1-204ENST00000537529 FOSBP53539 338 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 ATL3Q6DD88 541 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 THSD7AQ9UPZ6 1657 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 PATL2C9JE40 543 aaKnown RBP18.37■□□□□ 0.53
MKS1-204ENST00000537529 GNAT2P19087 354 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 NYXQ9GZU5 481 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 NUP62CLQ9H1M0 184 aa18.37■□□□□ 0.53
MKS1-204ENST00000537529 GNL3LQ9NVN8 582 aaKnown RBP18.37■□□□□ 0.53
MKS1-204ENST00000537529 MYO5AQ9Y4I1 1855 aaKnown RBP18.36■□□□□ 0.53
MKS1-204ENST00000537529 NHSQ6T4R5 1651 aa18.36■□□□□ 0.53
MKS1-204ENST00000537529 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms