RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 APPBP2Q92624 585 aa16.75■□□□□ 0.27
USP44-203ENST00000537435 CARD10Q9BWT7 1032 aa16.75■□□□□ 0.27
USP44-203ENST00000537435 PAPPAQ13219 1627 aa16.75■□□□□ 0.27
USP44-203ENST00000537435 FAM177BA6PVY3 158 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 PRC1O43663 620 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 PCCAP05165 728 aaPredicted RBP16.74■□□□□ 0.27
USP44-203ENST00000537435 PI16Q6UXB8 463 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 ZNF710Q8N1W2 664 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 A0A087WWV3 80 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 KLF18A0A0U1RQI7 1052 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 CDC25BP30305 580 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 TRIM28Q13263 835 aaKnown RBP16.74■□□□□ 0.27
USP44-203ENST00000537435 IFIT5Q13325 482 aaKnown RBP16.74■□□□□ 0.27
USP44-203ENST00000537435 CCDC144BQ3MJ40 725 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 SARM1Q6SZW1 724 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 CCDC144CPQ8IYA2 1237 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 MB21D2Q8IYB1 491 aaPredicted RBP16.74■□□□□ 0.27
USP44-203ENST00000537435 STRN4Q9NRL3 753 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 PCDHA7Q9UN72 937 aa16.74■□□□□ 0.27
USP44-203ENST00000537435 RIOK3O14730 519 aaKnown RBP16.73■□□□□ 0.27
USP44-203ENST00000537435 CSF1RP07333 972 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 KIF6Q6ZMV9 814 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 PLA2G12BQ9BX93 195 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 TMOD3Q9NYL9 352 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 MYH15Q9Y2K3 1946 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 GOLGA8BA8MQT2 603 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 BECN2A8MW95 431 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 ZBTB38Q8NAP3 1195 aaPredicted RBP16.73■□□□□ 0.27
USP44-203ENST00000537435 NCOA7Q8NI08 942 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 CACTINQ8WUQ7 758 aaKnown RBP16.73■□□□□ 0.27
USP44-203ENST00000537435 MRPS27Q92552 414 aaKnown RBP16.73■□□□□ 0.27
USP44-203ENST00000537435 C8orf76Q96K31 380 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 ANO10Q9NW15 660 aa16.73■□□□□ 0.27
USP44-203ENST00000537435 GPAA1O43292 621 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 ANTXR2P58335 489 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 RAB11FIP4Q86YS3 637 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 ERCC4Q92889 916 aaPredicted RBP16.72■□□□□ 0.27
USP44-203ENST00000537435 ORC3Q9UBD5 711 aaPredicted RBP16.72■□□□□ 0.27
USP44-203ENST00000537435 HPS5Q9UPZ3 1129 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 DHX16O60231 1041 aaKnown RBP16.72■□□□□ 0.27
USP44-203ENST00000537435 ADALQ6DHV7 355 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 RALYLQ86SE5 291 aaKnown RBP16.72■□□□□ 0.27
USP44-203ENST00000537435 FMR1NBQ8N0W7 255 aaPredicted RBP16.72■□□□□ 0.27
USP44-203ENST00000537435 BCL2L12Q9HB09 334 aa16.72■□□□□ 0.27
USP44-203ENST00000537435 ZNF213O14771 459 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 POLR3DP05423 398 aaPredicted RBP16.71■□□□□ 0.27
USP44-203ENST00000537435 ATP2B3Q16720 1220 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 METTL24Q5JXM2 366 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 DHX40Q8IX18 779 aaKnown RBP16.71■□□□□ 0.27
USP44-203ENST00000537435 SYNE4Q8N205 404 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 LINC00301Q8NCQ3 95 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 CLIC4Q9Y696 253 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
USP44-203ENST00000537435 A0A1B0GVL5 298 aa16.71■□□□□ 0.26
USP44-203ENST00000537435 STK38Q15208 465 aa16.71■□□□□ 0.26
USP44-203ENST00000537435 FBXO18Q8NFZ0 1043 aa16.71■□□□□ 0.26
USP44-203ENST00000537435 MRFAP1L1Q96HT8 127 aa16.71■□□□□ 0.26
USP44-203ENST00000537435 ASAP1Q9ULH1 1129 aa16.71■□□□□ 0.26
USP44-203ENST00000537435 ABCC12Q96J65 1359 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 CPLX1O14810 134 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 MCAMP43121 646 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 SF3A1Q15459 793 aaKnown RBP16.7■□□□□ 0.26
USP44-203ENST00000537435 C16orf45Q96MC5 204 aaPredicted RBP16.7■□□□□ 0.26
USP44-203ENST00000537435 A0A1W2PQ27 194 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 A0A1W2PQ64 194 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 A0A1W2PQD8 194 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 EVA1CP58658 441 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 LDHAL6AQ6ZMR3 332 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 CEP57L1Q8IYX8 460 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 FBXW7Q969H0 707 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 SDF4Q9BRK5 362 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 GJB4Q9NTQ9 266 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 RIPOR2Q9Y4F9 1068 aa16.7■□□□□ 0.26
USP44-203ENST00000537435 RIC1Q4ADV7 1423 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 ITGA6P23229 1130 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 GPTP24298 496 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 NDUFA8P51970 172 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 TEX13AQ9BXU3 409 aaPredicted RBP16.69■□□□□ 0.26
USP44-203ENST00000537435 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.69■□□□□ 0.26
USP44-203ENST00000537435 YEATS4O95619 227 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 MYSM1Q5VVJ2 828 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 GIGYF2Q6Y7W6 1299 aaKnown RBP16.69■□□□□ 0.26
USP44-203ENST00000537435 LRRC8AQ8IWT6 810 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 AOPEPQ8N6M6 819 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 KCNG4Q8TDN1 519 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 GREM2Q9H772 168 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 POLR3EQ9NVU0 708 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 SOS2Q07890 1332 aaPredicted RBP16.69■□□□□ 0.26
USP44-203ENST00000537435 MAP3K15Q6ZN16 1313 aa16.69■□□□□ 0.26
USP44-203ENST00000537435 HLFQ16534 295 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 TTLL11Q8NHH1 800 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 PIGBQ92521 554 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 SHANK3Q9BYB0 1731 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 SPTLC2O15270 562 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 TNNT1P13805 278 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 ADD2P35612 726 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 ARID5BQ14865 1188 aa16.68■□□□□ 0.26
USP44-203ENST00000537435 BRAPQ7Z569 592 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms