RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 PRKAG2Q9UGJ0 569 aa8.39□□□□□ -1.07
PRKDC-208ENST00000536710 ELOA3CA0A087WX78 387 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-208ENST00000536710 ELOA3DA6NLF2 546 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-208ENST00000536710 RGS9O75916 674 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-208ENST00000536710 LMNB1P20700 586 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 LIG3P49916 1009 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 MAP3K10Q02779 954 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 ARID5AQ03989 594 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 PPP2R3AQ06190 1150 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 FAAP100Q0VG06 881 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 ELOA3BQ3SY89 546 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 RPS26P11Q5JNZ5 115 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-208ENST00000536710 KIAA0825Q8IV33 1275 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 NPAS3Q8IXF0 933 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 SLC43A3Q8NBI5 491 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 ELOA3Q8NG57 546 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 NECAB3Q96P71 396 aaPredicted RBP8.38□□□□□ -1.07
PRKDC-208ENST00000536710 LPIN3Q9BQK8 851 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 TMEM39AQ9NV64 488 aa8.38□□□□□ -1.07
PRKDC-208ENST00000536710 ENC1O14682 589 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 CDC25BP30305 580 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 CABP4P57796 275 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 PCDH1Q08174 1060 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 TTBK2Q6IQ55 1244 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 GOLGA6L1Q8N7Z2 621 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 UBXN4Q92575 508 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 SH2B1Q9NRF2 756 aaPredicted RBP8.37□□□□□ -1.07
PRKDC-208ENST00000536710 FRRS1LQ9P0K9 344 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 TLR6Q9Y2C9 796 aa8.37□□□□□ -1.07
PRKDC-208ENST00000536710 ATP2B1P20020 1258 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 EIF4A3P38919 411 aaKnown RBP8.36□□□□□ -1.07
PRKDC-208ENST00000536710 FAM160A1Q05DH4 1040 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 RNFT1Q5M7Z0 435 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 GPRASP2Q96D09 838 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 JPH1Q9HDC5 661 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-208ENST00000536710 GDF2Q9UK05 429 aaPredicted RBP8.36□□□□□ -1.07
PRKDC-208ENST00000536710 SAMM50Q9Y512 469 aa8.36□□□□□ -1.07
PRKDC-208ENST00000536710 PAGE1O75459 146 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 CDC27P30260 824 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 IKBKEQ14164 716 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 SNAP47Q5SQN1 464 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 ZNF787Q6DD87 383 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 ADAMTSL4Q6UY14 1074 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 VN1R5Q7Z5H4 357 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 PHC3Q8NDX5 983 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 ADAM19Q9H013 955 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 ADAMTS1Q9UHI8 967 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 SOX13Q9UN79 622 aa8.35□□□□□ -1.07
PRKDC-208ENST00000536710 LOC105371045A0A1W2PR82 267 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 PF4P02776 101 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 GTF2F1P35269 517 aaKnown RBP eCLIP8.34□□□□□ -1.07
PRKDC-208ENST00000536710 ZNF423Q2M1K9 1284 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 PCNX4Q63HM2 1172 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 SLCO4C1Q6ZQN7 724 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 ZNF296Q8WUU4 475 aaPredicted RBP8.34□□□□□ -1.07
PRKDC-208ENST00000536710 CBX8Q9HC52 389 aa8.34□□□□□ -1.07
PRKDC-208ENST00000536710 TERTO14746 1132 aaKnown RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 B3GALT4O96024 378 aa8.33□□□□□ -1.08
PRKDC-208ENST00000536710 GJA8P48165 433 aa8.33□□□□□ -1.08
PRKDC-208ENST00000536710 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 CAMK2GQ13555 558 aaPredicted RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 IL22RA1Q8N6P7 574 aa8.33□□□□□ -1.08
PRKDC-208ENST00000536710 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
PRKDC-208ENST00000536710 DDX54Q8TDD1 881 aaKnown RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 DHX38Q92620 1227 aaKnown RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 SUPT16HQ9Y5B9 1047 aaKnown RBP8.33□□□□□ -1.08
PRKDC-208ENST00000536710 ERBB4Q15303 1308 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 VSIG8P0DPA2 414 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 ESRRAP11474 423 aaPredicted RBP8.32□□□□□ -1.08
PRKDC-208ENST00000536710 EPHA1P21709 976 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 FBXL19Q6PCT2 694 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 AGMOQ6ZNB7 445 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 SULF2Q8IWU5 870 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 SLC7A3Q8WY07 619 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 RHOVQ96L33 236 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 MDFIQ99750 246 aa8.32□□□□□ -1.08
PRKDC-208ENST00000536710 ADAMTS2O95450 1211 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 EPXP11678 715 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 TFE3P19532 575 aaPredicted RBP8.31□□□□□ -1.08
PRKDC-208ENST00000536710 NME2P22392 152 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 RPS26P62854 115 aaKnown RBP8.31□□□□□ -1.08
PRKDC-208ENST00000536710 LMNB2Q03252 620 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 TXNDC11Q6PKC3 985 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 CACTIN-AS1Q8N1I8 211 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 TTC9Q92623 222 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 IRF7Q92985 503 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 GMLQ99445 158 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
PRKDC-208ENST00000536710 MIR1-1HGQ9H1L0 117 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 STARD13Q9Y3M8 1113 aa8.31□□□□□ -1.08
PRKDC-208ENST00000536710 H3BRJ5 948 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 LILRB5O75023 590 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 ALBP02768 609 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 ATF4P18848 351 aaPredicted RBP8.3□□□□□ -1.08
PRKDC-208ENST00000536710 APOBRQ0VD83 1088 aa8.3□□□□□ -1.08
PRKDC-208ENST00000536710 NFX1Q12986 1120 aaKnown RBP8.3□□□□□ -1.08
PRKDC-208ENST00000536710 DIEXFQ68CQ4 756 aaKnown RBP8.3□□□□□ -1.08
PRKDC-208ENST00000536710 FAM117BQ6P1L5 589 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms