RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 CEBPZQ03701 1054 aaKnown RBP8.02□□□□□ -1.13
CPSF7-215ENST00000536145 PPP2R3AQ06190 1150 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 GPS2Q13227 327 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 GORABQ5T7V8 394 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 JAKMIP3Q5VZ66 844 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
CPSF7-215ENST00000536145 TICAM2Q86XR7 235 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 PLCD3Q8N3E9 789 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 CCDC191Q8NCU4 936 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 MSANTD4Q8NCY6 345 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 ZNF274Q96GC6 653 aaPredicted RBP8.02□□□□□ -1.13
CPSF7-215ENST00000536145 POLR3EQ9NVU0 708 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 HPSEQ9Y251 543 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 PPP2R2CQ9Y2T4 447 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 RRP15Q9Y3B9 282 aaKnown RBP8.02□□□□□ -1.13
CPSF7-215ENST00000536145 SH3TC1Q8TE82 1336 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
CPSF7-215ENST00000536145 CARMIL3Q8ND23 1372 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 PALLDQ8WX93 1383 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 A0A1B0GVL5 298 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 GOLGA6L9A6NEM1 432 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 TMEM232C9JQI7 657 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 ARHGAP6O43182 974 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 CBFA2T2O43439 604 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 NRDCO43847 1150 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 CPP00450 1065 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 SLC3A2P08195 630 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 HMGB1P09429 215 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 ATP1A3P13637 1013 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 CMA1P23946 247 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 PDIA3P30101 505 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 AMPHP49418 695 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 APOBRQ0VD83 1088 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 G3BP1Q13283 466 aaKnown RBP eCLIP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 LONRF2Q1L5Z9 754 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 BEND6Q5SZJ8 279 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 HOMER1Q86YM7 354 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 ELOA2Q8IYF1 753 aaPredicted RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 LINS1Q8NG48 757 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 EDC3Q96F86 508 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 AK7Q96M32 723 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 WDR24Q96S15 920 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 SEC62Q99442 399 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 DSCC1Q9BVC3 393 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 CWC15Q9P013 229 aaKnown RBP8.01□□□□□ -1.13
CPSF7-215ENST00000536145 RSPH14Q9UHP6 348 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 ADAM21Q9UKJ8 722 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 MAP3K2Q9Y2U5 619 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 CLIC4Q9Y696 253 aa8.01□□□□□ -1.13
CPSF7-215ENST00000536145 PLEKHG1Q9ULL1 1385 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 SIPA1L3O60292 1781 aaPredicted RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 GRM8O00222 908 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 ZSCAN12O43309 604 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 ZNF202O95125 648 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 ANXA1P04083 346 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 CHRM1P11229 460 aaPredicted RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 EIF2S2P20042 333 aaKnown RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 TXLNAP40222 546 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 ME1P48163 572 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 CEBPAP49715 358 aaPredicted RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 PROSER3Q2NL68 480 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 MCMDC2Q4G0Z9 681 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 NBPF6Q5VWK0 638 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 CCDC129Q6ZRS4 1044 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 KCNG4Q8TDN1 519 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 GOLGA1Q92805 767 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 CHMP4CQ96CF2 233 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 NBPF4Q96M43 638 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 HAUS7Q99871 368 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 SDF4Q9BRK5 362 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 BICC1Q9H694 974 aaKnown RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 ANKZF1Q9H8Y5 726 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 LGR6Q9HBX8 967 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 ARFGAP3Q9NP61 516 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 COPRSQ9NQ92 184 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 DBF4Q9UBU7 674 aaPredicted RBP8□□□□□ -1.13
CPSF7-215ENST00000536145 UBR1Q8IWV7 1749 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 MROH7-TTC4A0A0A0MT08 1334 aa8□□□□□ -1.13
CPSF7-215ENST00000536145 TMEM2Q9UHN6 1383 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 SPTLC2O15270 562 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 CUTAO60888 179 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 WDHD1O75717 1129 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 IVLP07476 585 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 C4AP0C0L4 1744 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 C4BP0C0L5 1744 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 HSP90B1P14625 803 aaKnown RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 PFKFB1P16118 471 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 FECHP22830 423 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 GUCY2CP25092 1073 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 LMOD1P29536 600 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 MAGEA9P43362 315 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 IRX3P78415 501 aaPredicted RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 MYL5Q02045 173 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 CWF19L2Q2TBE0 894 aaKnown RBP7.99□□□□□ -1.13
CPSF7-215ENST00000536145 TAF7LQ5H9L4 462 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 EPHA10Q5JZY3 1008 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 MYSM1Q5VVJ2 828 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 ICE2Q659A1 982 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 PPP4R3CPQ6ZMV5 832 aa7.99□□□□□ -1.13
CPSF7-215ENST00000536145 TC2NQ8N9U0 490 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms