RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 OTUD7AQ8TE49 926 aaPredicted RBP19.75■□□□□ 0.75
VAMP1-205ENST00000535927 ZNRF3Q9ULT6 936 aa19.75■□□□□ 0.75
VAMP1-205ENST00000535927 DICER1Q9UPY3 1922 aaKnown RBP19.74■□□□□ 0.75
VAMP1-205ENST00000535927 WTIPA6NIX2 430 aaPredicted RBP19.74■□□□□ 0.75
VAMP1-205ENST00000535927 AOC3Q16853 763 aa19.74■□□□□ 0.75
VAMP1-205ENST00000535927 TTC22Q5TAA0 569 aa19.74■□□□□ 0.75
VAMP1-205ENST00000535927 SPTY2D1Q68D10 685 aaPredicted RBP19.74■□□□□ 0.75
VAMP1-205ENST00000535927 EVI5LQ96CN4 794 aa19.74■□□□□ 0.75
VAMP1-205ENST00000535927 ZNF277Q9NRM2 450 aaPredicted RBP19.74■□□□□ 0.75
VAMP1-205ENST00000535927 AKAP11Q9UKA4 1901 aa19.74■□□□□ 0.75
VAMP1-205ENST00000535927 MYH13Q9UKX3 1938 aa19.74■□□□□ 0.75
VAMP1-205ENST00000535927 ZC3H4Q9UPT8 1303 aaKnown RBP19.74■□□□□ 0.75
VAMP1-205ENST00000535927 HSPA6P17066 643 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 KLRK1P26718 216 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 STRIP1Q5VSL9 837 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 CNTROBQ8N137 903 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 ZNF526Q8TF50 670 aaPredicted RBP19.73■□□□□ 0.75
VAMP1-205ENST00000535927 BCL11AQ9H165 835 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 SBF1O95248 1867 aa19.73■□□□□ 0.75
VAMP1-205ENST00000535927 ECE2O60344 883 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 EIF5BO60841 1220 aaKnown RBP19.72■□□□□ 0.75
VAMP1-205ENST00000535927 MCAMP43121 646 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 RGS3P49796 1198 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 RASGRF1Q13972 1273 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 BOLA2Q9H3K6 86 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 MYO3BQ8WXR4 1341 aa19.72■□□□□ 0.75
VAMP1-205ENST00000535927 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 USP17L3A6NCW0 530 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 USP17L4A6NCW7 530 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 TNIP1Q15025 636 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 TTLL5Q6EMB2 1281 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 ZSCAN25Q6NSZ9 544 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 USP17L1Q7RTZ2 530 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 PAG1Q9NWQ8 432 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 WWC3Q9ULE0 1092 aa19.71■□□□□ 0.75
VAMP1-205ENST00000535927 HIP1O00291 1037 aa19.7■□□□□ 0.74
VAMP1-205ENST00000535927 SLC51AQ86UW1 340 aa19.7■□□□□ 0.74
VAMP1-205ENST00000535927 MRIQ9BWK5 157 aa19.7■□□□□ 0.74
VAMP1-205ENST00000535927 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.7■□□□□ 0.74
VAMP1-205ENST00000535927 RFX7Q2KHR2 1363 aa19.7■□□□□ 0.74
VAMP1-205ENST00000535927 FZD9O00144 591 aa19.69■□□□□ 0.74
VAMP1-205ENST00000535927 ZFYP08048 801 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-205ENST00000535927 EIF6P56537 245 aaKnown RBP19.69■□□□□ 0.74
VAMP1-205ENST00000535927 DOK7Q18PE1 504 aa19.69■□□□□ 0.74
VAMP1-205ENST00000535927 GPR101Q96P66 508 aaPredicted RBP19.69■□□□□ 0.74
VAMP1-205ENST00000535927 DBNDD1Q9H9R9 158 aa19.69■□□□□ 0.74
VAMP1-205ENST00000535927 PSME4Q14997 1843 aa19.69■□□□□ 0.74
VAMP1-205ENST00000535927 MAP3K12Q12852 859 aa19.68■□□□□ 0.74
VAMP1-205ENST00000535927 SLF2Q8IX21 1173 aa19.68■□□□□ 0.74
VAMP1-205ENST00000535927 KBTBD3Q8NAB2 608 aa19.68■□□□□ 0.74
VAMP1-205ENST00000535927 MAST3O60307 1309 aa19.68■□□□□ 0.74
VAMP1-205ENST00000535927 TRIM6-TRIM34B2RNG4 842 aa19.67■□□□□ 0.74
VAMP1-205ENST00000535927 CYP2E1P05181 493 aaPredicted RBP19.67■□□□□ 0.74
VAMP1-205ENST00000535927 VIL1P09327 827 aaKnown RBP19.67■□□□□ 0.74
VAMP1-205ENST00000535927 RPS12P25398 132 aaKnown RBP19.67■□□□□ 0.74
VAMP1-205ENST00000535927 ZAP70P43403 619 aa19.67■□□□□ 0.74
VAMP1-205ENST00000535927 SCARF1Q14162 830 aa19.67■□□□□ 0.74
VAMP1-205ENST00000535927 ERICH6Q7L0X2 663 aa19.67■□□□□ 0.74
VAMP1-205ENST00000535927 AGBL3Q8NEM8 1001 aa19.67■□□□□ 0.74
VAMP1-205ENST00000535927 DNAJC2Q99543 621 aaKnown RBP19.67■□□□□ 0.74
VAMP1-205ENST00000535927 GTF2IP78347 998 aa19.66■□□□□ 0.74
VAMP1-205ENST00000535927 HDLBPQ00341 1268 aaKnown RBP19.66■□□□□ 0.74
VAMP1-205ENST00000535927 RASSF7Q02833 373 aa19.66■□□□□ 0.74
VAMP1-205ENST00000535927 CIAPIN1Q6FI81 312 aa19.66■□□□□ 0.74
VAMP1-205ENST00000535927 LRP2BPQ9P2M1 347 aa19.66■□□□□ 0.74
VAMP1-205ENST00000535927 AK9Q5TCS8 1911 aa19.66■□□□□ 0.74
VAMP1-205ENST00000535927 GOLIM4O00461 696 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 LDHBP07195 334 aaKnown RBP19.65■□□□□ 0.74
VAMP1-205ENST00000535927 LDHCP07864 332 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 SDSP20132 328 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 GSTO1P78417 241 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 MFSD14BQ5SR56 506 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 TSHZ3Q63HK5 1081 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 CASC1Q6TDU7 716 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 CERS3Q8IU89 383 aa19.65■□□□□ 0.74
VAMP1-205ENST00000535927 YDJCA8MPS7 323 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 CHAF1AQ13111 956 aaPredicted RBP19.64■□□□□ 0.73
VAMP1-205ENST00000535927 DACT2Q5SW24 774 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 DPF2Q92785 391 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 RILPL2Q969X0 211 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 SNRKQ9NRH2 765 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 RNF181Q9P0P0 153 aa19.64■□□□□ 0.73
VAMP1-205ENST00000535927 IQSEC3Q9UPP2 1182 aaPredicted RBP19.64■□□□□ 0.73
VAMP1-205ENST00000535927 GSPT1P15170 499 aaKnown RBP19.63■□□□□ 0.73
VAMP1-205ENST00000535927 CXCL9Q07325 125 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 UBE3CQ15386 1083 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 DPY19L2Q6NUT2 758 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 RSBN1LQ6PCB5 846 aaPredicted RBP19.63■□□□□ 0.73
VAMP1-205ENST00000535927 RUFY2Q8WXA3 655 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 FAM163AQ96GL9 167 aaPredicted RBP19.63■□□□□ 0.73
VAMP1-205ENST00000535927 FSD1Q9BTV5 496 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 SCN9AQ15858 1988 aa19.63■□□□□ 0.73
VAMP1-205ENST00000535927 DOCK2Q92608 1830 aa19.62■□□□□ 0.73
VAMP1-205ENST00000535927 MAP4K4O95819 1239 aaPredicted RBP19.62■□□□□ 0.73
VAMP1-205ENST00000535927 C9orf131Q5VYM1 1079 aa19.62■□□□□ 0.73
VAMP1-205ENST00000535927 GPC2Q8N158 579 aa19.62■□□□□ 0.73
VAMP1-205ENST00000535927 ABCF2Q9UG63 623 aa19.62■□□□□ 0.73
VAMP1-205ENST00000535927 HDAC9Q9UKV0 1011 aa19.62■□□□□ 0.73
VAMP1-205ENST00000535927 MYH7P12883 1935 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms