RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
CHD4-204ENST00000535810 NOB1Q9ULX3 412 aaKnown RBP11.13□□□□□ -0.63
CHD4-204ENST00000535810 TRPM7Q96QT4 1865 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 USP17L8P0C7I0 530 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 HNRNPUQ00839 825 aaKnown RBP eCLIP11.12□□□□□ -0.63
CHD4-204ENST00000535810 RBM26Q5T8P6 1007 aaKnown RBP11.12□□□□□ -0.63
CHD4-204ENST00000535810 STRIP1Q5VSL9 837 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 CDC37L1Q7L3B6 337 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 BEGAINQ9BUH8 593 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 MXD3Q9BW11 206 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 API5Q9BZZ5 524 aaKnown RBP11.12□□□□□ -0.63
CHD4-204ENST00000535810 CNNM1Q9NRU3 951 aa11.12□□□□□ -0.63
CHD4-204ENST00000535810 ABT1Q9ULW3 272 aaKnown RBP11.12□□□□□ -0.63
CHD4-204ENST00000535810 KIF16BQ96L93 1317 aa11.11□□□□□ -0.63
CHD4-204ENST00000535810 PDE4DIPQ5VU43 2346 aa11.11□□□□□ -0.63
CHD4-204ENST00000535810 CELF2O95319 508 aaKnown RBP11.11□□□□□ -0.63
CHD4-204ENST00000535810 KRT26Q7Z3Y9 468 aa11.11□□□□□ -0.63
CHD4-204ENST00000535810 PUS3Q9BZE2 481 aaKnown RBP11.11□□□□□ -0.63
CHD4-204ENST00000535810 CD209Q9NNX6 404 aa11.11□□□□□ -0.63
CHD4-204ENST00000535810 GGA3Q9NZ52 723 aa11.11□□□□□ -0.63
CHD4-204ENST00000535810 ASTN2O75129 1339 aaPredicted RBP11.1□□□□□ -0.63
CHD4-204ENST00000535810 MYO3BQ8WXR4 1341 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 TNRC18O15417 2968 aaPredicted RBP11.1□□□□□ -0.63
CHD4-204ENST00000535810 ADM5C9JUS6 153 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 PLIN1O60240 522 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 TTLL5Q6EMB2 1281 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 DLK2Q6UY11 383 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 ZNF804AQ7Z570 1209 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 USP48Q86UV5 1035 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 ARHGAP45Q92619 1136 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 FBXW7Q969H0 707 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 DCPSQ96C86 337 aaKnown RBP11.1□□□□□ -0.63
CHD4-204ENST00000535810 MYOZ2Q9NPC6 264 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 TAOK2Q9UL54 1235 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 RIPOR2Q9Y4F9 1068 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 TLL2Q9Y6L7 1015 aa11.1□□□□□ -0.63
CHD4-204ENST00000535810 MROH5Q6ZUA9 1318 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 STK25O00506 426 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 IL1R1P14778 569 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 GTF2IP78347 998 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 SCARF1Q14162 830 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 ANGEL2Q5VTE6 544 aaKnown RBP11.09□□□□□ -0.63
CHD4-204ENST00000535810 SAPCD2Q86UD0 394 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 KLHDC4Q8TBB5 520 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 ZNF408Q9H9D4 720 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 THSD7BQ9C0I4 1608 aa11.09□□□□□ -0.63
CHD4-204ENST00000535810 UBTFL1P0CB47 393 aaPredicted RBP11.08□□□□□ -0.64
CHD4-204ENST00000535810 TRIM27P14373 513 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 ECE1P42892 770 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 RFX5P48382 616 aaPredicted RBP11.08□□□□□ -0.64
CHD4-204ENST00000535810 UBE4AQ14139 1066 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 LRRC24Q50LG9 513 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 KIAA0825Q8IV33 1275 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 SULF1Q8IWU6 871 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 CERS5Q8N5B7 392 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 VGLL2Q8N8G2 317 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 SPRYD3Q8NCJ5 442 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 POLR2AP24928 1970 aaKnown RBP11.08□□□□□ -0.64
CHD4-204ENST00000535810 ZBED9Q6R2W3 1325 aa11.08□□□□□ -0.64
CHD4-204ENST00000535810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.07□□□□□ -0.64
CHD4-204ENST00000535810 CA12O43570 354 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 BCAR3O75815 825 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 GYG1P46976 350 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 NBPF9Q3BBW0 867 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 METTL24Q5JXM2 366 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 INTS3Q68E01 1043 aaKnown RBP11.07□□□□□ -0.64
CHD4-204ENST00000535810 ZFP91Q96JP5 570 aaPredicted RBP11.07□□□□□ -0.64
CHD4-204ENST00000535810 CAPNS2Q96L46 248 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 MEIS3Q99687 375 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 MCOLN1Q9GZU1 580 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 LRRFIP2Q9Y608 721 aaKnown RBP11.07□□□□□ -0.64
CHD4-204ENST00000535810 PITPNM2Q9BZ72 1349 aa11.07□□□□□ -0.64
CHD4-204ENST00000535810 WNT10BO00744 389 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 IPO8O15397 1037 aaKnown RBP11.06□□□□□ -0.64
CHD4-204ENST00000535810 SASH1O94885 1247 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 PDE8BO95263 885 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 HIBADHP31937 336 aaKnown RBP11.06□□□□□ -0.64
CHD4-204ENST00000535810 MMP14P50281 582 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 PTPN12Q05209 780 aaKnown RBP11.06□□□□□ -0.64
CHD4-204ENST00000535810 CYP4F22Q6NT55 531 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 ATF7IPQ6VMQ6 1270 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 TDRD7Q8NHU6 1098 aaKnown RBP11.06□□□□□ -0.64
CHD4-204ENST00000535810 HHIPL1Q96JK4 782 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 FAM84BQ96KN1 310 aaPredicted RBP11.06□□□□□ -0.64
CHD4-204ENST00000535810 PCDHB8Q9UN66 801 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 TNNQ9UQP3 1299 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 JAG2Q9Y219 1238 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 PCDHB13Q9Y5F0 798 aa11.06□□□□□ -0.64
CHD4-204ENST00000535810 EYA2O00167 538 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 MAP2K2P36507 400 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 FKBP1AP62942 108 aaKnown RBP11.05□□□□□ -0.64
CHD4-204ENST00000535810 GRM1Q13255 1194 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 PUM3Q15397 648 aaKnown RBP11.05□□□□□ -0.64
CHD4-204ENST00000535810 FRAT1Q92837 279 aaPredicted RBP11.05□□□□□ -0.64
CHD4-204ENST00000535810 CDCA5Q96FF9 252 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 ZBED3Q96IU2 234 aaPredicted RBP11.05□□□□□ -0.64
CHD4-204ENST00000535810 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
CHD4-204ENST00000535810 HDAC9Q9UKV0 1011 aa11.05□□□□□ -0.64
CHD4-204ENST00000535810 SCAF8Q9UPN6 1271 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms