RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 ADORA1P30542 326 aa28.11■■■□□ 2.09
SFSWAP-204ENST00000535399 FKBP1AP62942 108 aaKnown RBP28.11■■■□□ 2.09
SFSWAP-204ENST00000535399 TBC1D10BQ4KMP7 808 aaPredicted RBP28.11■■■□□ 2.09
SFSWAP-204ENST00000535399 IQSEC3Q9UPP2 1182 aaPredicted RBP28.11■■■□□ 2.09
SFSWAP-204ENST00000535399 A0A1B0GUL7 405 aa28.1■■■□□ 2.09
SFSWAP-204ENST00000535399 OS9Q13438 667 aaPredicted RBP28.1■■■□□ 2.09
SFSWAP-204ENST00000535399 HMMRO75330 724 aa28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 KIF4BQ2VIQ3 1234 aa28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 RBM26Q5T8P6 1007 aaKnown RBP28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 MAP1SQ66K74 1059 aaPredicted RBP28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 KIAA0825Q8IV33 1275 aa28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 CRBNQ96SW2 442 aa28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 PGAP2Q9UHJ9 254 aa28.08■■■□□ 2.09
SFSWAP-204ENST00000535399 PHKA1P46020 1223 aa28.07■■■□□ 2.08
SFSWAP-204ENST00000535399 ZC3H15Q8WU90 426 aaKnown RBP28.07■■■□□ 2.08
SFSWAP-204ENST00000535399 XAGE2Q96GT9 111 aa28.07■■■□□ 2.08
SFSWAP-204ENST00000535399 GPR108Q9NPR9 543 aa28.07■■■□□ 2.08
SFSWAP-204ENST00000535399 EXOC6BQ9Y2D4 811 aa28.07■■■□□ 2.08
SFSWAP-204ENST00000535399 FRAT2O75474 233 aaPredicted RBP28.06■■■□□ 2.08
SFSWAP-204ENST00000535399 CHAF1AQ13111 956 aaPredicted RBP28.06■■■□□ 2.08
SFSWAP-204ENST00000535399 CNTROBQ8N137 903 aa28.06■■■□□ 2.08
SFSWAP-204ENST00000535399 MYOZ2Q9NPC6 264 aa28.06■■■□□ 2.08
SFSWAP-204ENST00000535399 ITGBL1O95965 494 aaPredicted RBP28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 HSPA6P17066 643 aa28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 MMP14P50281 582 aa28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 MFSD14BQ5SR56 506 aa28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 CCDC102BQ68D86 513 aa28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 OGFOD1Q8N543 542 aa28.05■■■□□ 2.08
SFSWAP-204ENST00000535399 ZBTB22O15209 634 aa28.04■■■□□ 2.08
SFSWAP-204ENST00000535399 TNNI3KQ59H18 835 aa28.04■■■□□ 2.08
SFSWAP-204ENST00000535399 NEUROD6Q96NK8 337 aa28.04■■■□□ 2.08
SFSWAP-204ENST00000535399 FPGT-TNNI3KV9GXZ4 949 aa28.04■■■□□ 2.08
SFSWAP-204ENST00000535399 COL1A1P02452 1464 aaPredicted RBP28.03■■■□□ 2.08
SFSWAP-204ENST00000535399 HSP90AB4PQ58FF6 505 aa28.03■■■□□ 2.08
SFSWAP-204ENST00000535399 GNL3LQ9NVN8 582 aaKnown RBP28.03■■■□□ 2.08
SFSWAP-204ENST00000535399 HDAC9Q9UKV0 1011 aa28.03■■■□□ 2.08
SFSWAP-204ENST00000535399 SUPT16HQ9Y5B9 1047 aaKnown RBP28.03■■■□□ 2.08
SFSWAP-204ENST00000535399 PASKQ96RG2 1323 aa28.02■■■□□ 2.08
SFSWAP-204ENST00000535399 ERC1Q8IUD2 1116 aa28.02■■■□□ 2.08
SFSWAP-204ENST00000535399 TBC1D22AQ8WUA7 517 aa28.02■■■□□ 2.08
SFSWAP-204ENST00000535399 F8W031 263 aaPredicted RBP28.01■■■□□ 2.07
SFSWAP-204ENST00000535399 GRIK5Q16478 980 aa28.01■■■□□ 2.07
SFSWAP-204ENST00000535399 ARAP2Q8WZ64 1704 aa28.01■■■□□ 2.07
SFSWAP-204ENST00000535399 ASTN2O75129 1339 aaPredicted RBP28■■■□□ 2.07
SFSWAP-204ENST00000535399 SEMA3EO15041 775 aa28■■■□□ 2.07
SFSWAP-204ENST00000535399 SCARF1Q14162 830 aa28■■■□□ 2.07
SFSWAP-204ENST00000535399 PCDHB15Q9Y5E8 787 aa28■■■□□ 2.07
SFSWAP-204ENST00000535399 ZBED3Q96IU2 234 aaPredicted RBP27.99■■■□□ 2.07
SFSWAP-204ENST00000535399 DENND2AQ9ULE3 1009 aa27.99■■■□□ 2.07
SFSWAP-204ENST00000535399 RASGRF1Q13972 1273 aa27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 WDR66Q8TBY9 1149 aa27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 RHPN1Q8TCX5 695 aa27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 EAF2Q96CJ1 260 aaPredicted RBP27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 DBNDD2Q9BQY9 259 aa27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 GGA3Q9NZ52 723 aa27.98■■■□□ 2.07
SFSWAP-204ENST00000535399 WNT10BO00744 389 aa27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 APLP1P51693 650 aa27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 NBPF9Q3BBW0 867 aa27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 GORABQ5T7V8 394 aa27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 MTMR14Q8NCE2 650 aa27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 GLIS2Q9BZE0 524 aaPredicted RBP27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 TTF2Q9UNY4 1162 aaKnown RBP27.97■■■□□ 2.07
SFSWAP-204ENST00000535399 RAB11FIP3O75154 756 aa27.96■■■□□ 2.07
SFSWAP-204ENST00000535399 KIF1BPQ96EK5 621 aa27.96■■■□□ 2.07
SFSWAP-204ENST00000535399 SUGT1Q9Y2Z0 365 aa27.96■■■□□ 2.07
SFSWAP-204ENST00000535399 PCDHAC2Q9Y5I4 1007 aa27.96■■■□□ 2.07
SFSWAP-204ENST00000535399 PDS5AQ29RF7 1337 aaKnown RBP27.95■■■□□ 2.07
SFSWAP-204ENST00000535399 TRAF5O00463 557 aa27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 ARID4AP29374 1257 aaPredicted RBP27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 FMR1Q06787 632 aaKnown RBP eCLIP27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 CFAP100Q494V2 611 aa27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 CDC37L1Q7L3B6 337 aa27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 CCDC8Q9H0W5 538 aaPredicted RBP27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 IL1RAPL2Q9NP60 686 aa27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 TLR7Q9NYK1 1049 aaKnown RBP27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 DBNLQ9UJU6 430 aaKnown RBP27.95■■■□□ 2.06
SFSWAP-204ENST00000535399 SALL1Q9NSC2 1324 aa27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 APBB1O00213 710 aa27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 DLGAP5Q15398 846 aa27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 ANGEL2Q5VTE6 544 aaKnown RBP27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 USP48Q86UV5 1035 aa27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 DCPSQ96C86 337 aaKnown RBP27.94■■■□□ 2.06
SFSWAP-204ENST00000535399 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
SFSWAP-204ENST00000535399 SERPINA10Q9UK55 444 aa27.93■■■□□ 2.06
SFSWAP-204ENST00000535399 PITPNM2Q9BZ72 1349 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 SPDYE2BA6NHP3 402 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 UQCRFS1P1P0C7P4 283 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 SPDYE6P0CI01 402 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 AACSQ86V21 672 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 DCTPP1Q9H773 170 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 HMG20BQ9P0W2 317 aa27.92■■■□□ 2.06
SFSWAP-204ENST00000535399 ADM5C9JUS6 153 aa27.91■■■□□ 2.06
SFSWAP-204ENST00000535399 CRKP46108 304 aa27.91■■■□□ 2.06
SFSWAP-204ENST00000535399 HTRA3P83110 453 aa27.91■■■□□ 2.06
SFSWAP-204ENST00000535399 CCDC158Q5M9N0 1113 aa27.91■■■□□ 2.06
SFSWAP-204ENST00000535399 PRMT6Q96LA8 375 aaPredicted RBP27.91■■■□□ 2.06
SFSWAP-204ENST00000535399 PRDX5P30044 214 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 MCAMP43121 646 aa27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 HDLBPQ00341 1268 aaKnown RBP27.9■■■□□ 2.06
SFSWAP-204ENST00000535399 AAMPQ13685 434 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms