RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 METTL12A8MUP2 240 aa9.28□□□□□ -0.92
PRKDC-205ENST00000535375 MAPK8P45983 427 aa9.28□□□□□ -0.92
PRKDC-205ENST00000535375 A0A096LPE4 126 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 A0A1W2PPZ6 126 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 C19orf57Q0VDD7 668 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 DOC2BQ14184 412 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 VN1R5Q7Z5H4 357 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 EPS8L3Q8TE67 593 aaKnown RBP9.27□□□□□ -0.93
PRKDC-205ENST00000535375 WFDC12Q8WWY7 111 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 KLHDC7BQ96G42 594 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 TCF12Q99081 682 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 AKTIPQ9H8T0 292 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 TRAK1Q9UPV9 953 aa9.27□□□□□ -0.93
PRKDC-205ENST00000535375 IREB2P48200 963 aaKnown RBP9.26□□□□□ -0.93
PRKDC-205ENST00000535375 ENOX2Q16206 610 aaKnown RBP9.26□□□□□ -0.93
PRKDC-205ENST00000535375 DUOXA2Q1HG44 320 aa9.26□□□□□ -0.93
PRKDC-205ENST00000535375 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
PRKDC-205ENST00000535375 EIF4EBP3O60516 100 aaPredicted RBP9.25□□□□□ -0.93
PRKDC-205ENST00000535375 GRIA4P48058 902 aa9.25□□□□□ -0.93
PRKDC-205ENST00000535375 ATP2B2Q01814 1243 aa9.25□□□□□ -0.93
PRKDC-205ENST00000535375 SPRED3Q2MJR0 410 aa9.25□□□□□ -0.93
PRKDC-205ENST00000535375 TMEM130Q8N3G9 435 aa9.25□□□□□ -0.93
PRKDC-205ENST00000535375 CLEC4MQ9H2X3 399 aaPredicted RBP9.25□□□□□ -0.93
PRKDC-205ENST00000535375 NOS3P29474 1203 aa9.24□□□□□ -0.93
PRKDC-205ENST00000535375 FOXD4L6Q3SYB3 417 aaPredicted RBP9.24□□□□□ -0.93
PRKDC-205ENST00000535375 FOXD4L3Q6VB84 417 aaPredicted RBP9.24□□□□□ -0.93
PRKDC-205ENST00000535375 ACAD11Q709F0 780 aa9.24□□□□□ -0.93
PRKDC-205ENST00000535375 HOMEZQ8IX15 550 aa9.24□□□□□ -0.93
PRKDC-205ENST00000535375 GZF1Q9H116 711 aaPredicted RBP9.24□□□□□ -0.93
PRKDC-205ENST00000535375 F8W735 103 aaPredicted RBP9.23□□□□□ -0.93
PRKDC-205ENST00000535375 DDX3YO15523 660 aaKnown RBP9.23□□□□□ -0.93
PRKDC-205ENST00000535375 ALX3O95076 343 aa9.23□□□□□ -0.93
PRKDC-205ENST00000535375 NLRP12P59046 1061 aa9.23□□□□□ -0.93
PRKDC-205ENST00000535375 PCDH1Q08174 1060 aa9.23□□□□□ -0.93
PRKDC-205ENST00000535375 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
PRKDC-205ENST00000535375 TPSG1Q9NRR2 321 aa9.23□□□□□ -0.93
PRKDC-205ENST00000535375 KCNK4Q9NYG8 393 aa9.23□□□□□ -0.93
PRKDC-205ENST00000535375 ESRRAP11474 423 aaPredicted RBP9.22□□□□□ -0.93
PRKDC-205ENST00000535375 GSTM4Q03013 218 aa9.22□□□□□ -0.93
PRKDC-205ENST00000535375 FMR1Q06787 632 aaKnown RBP eCLIP9.22□□□□□ -0.937e-7■■■□□ 14.8
PRKDC-205ENST00000535375 GRM2Q14416 872 aa9.22□□□□□ -0.93
PRKDC-205ENST00000535375 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.22□□□□□ -0.93
PRKDC-205ENST00000535375 ALG1LQ6GMV1 187 aa9.22□□□□□ -0.93
PRKDC-205ENST00000535375 TP53INP1Q96A56 240 aa9.22□□□□□ -0.93
PRKDC-205ENST00000535375 SOX17Q9H6I2 414 aaPredicted RBP9.22□□□□□ -0.93
PRKDC-205ENST00000535375 TMEM238LA0A1B0GVL6 79 aa9.21□□□□□ -0.94
PRKDC-205ENST00000535375 GLB1P16278 677 aa9.21□□□□□ -0.94
PRKDC-205ENST00000535375 HGSNATQ68CP4 663 aa9.21□□□□□ -0.94
PRKDC-205ENST00000535375 PRPF40BQ6NWY9 871 aaKnown RBP9.21□□□□□ -0.94
PRKDC-205ENST00000535375 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.21□□□□□ -0.94
PRKDC-205ENST00000535375 AGGF1Q8N302 714 aaeCLIP9.21□□□□□ -0.94
PRKDC-205ENST00000535375 FBF1Q8TES7 1133 aa9.21□□□□□ -0.94
PRKDC-205ENST00000535375 FOXD4L4Q8WXT5 416 aaPredicted RBP9.21□□□□□ -0.94
PRKDC-205ENST00000535375 ADAM11O75078 769 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 WISP1O95388 367 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
PRKDC-205ENST00000535375 PI16Q6UXB8 463 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 DTHD1Q6ZMT9 781 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 USP26Q9BXU7 913 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 BCO2Q9BYV7 579 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 CEP41Q9BYV8 373 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 ZFYVE1Q9HBF4 777 aa9.2□□□□□ -0.94
PRKDC-205ENST00000535375 ANKRD33BA6NCL7 494 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 TM4SF5O14894 197 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 ITPKAP23677 461 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 FCGRTP55899 365 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 UBASH3BQ8TF42 649 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 ZNF576Q9H609 170 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 ABCB6Q9NP58 842 aa9.19□□□□□ -0.94
PRKDC-205ENST00000535375 ZBTB7CA1YPR0 619 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 LDHBP07195 334 aaKnown RBP9.18□□□□□ -0.94
PRKDC-205ENST00000535375 P4HBP07237 508 aaKnown RBP9.18□□□□□ -0.94
PRKDC-205ENST00000535375 FGD1P98174 961 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 KIAA1211Q6ZU35 1233 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 RUSC1Q9BVN2 902 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 RNF208Q9H0X6 261 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 SEMA6BQ9H3T3 888 aa9.18□□□□□ -0.94
PRKDC-205ENST00000535375 CYP11A1P05108 521 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 XRCC5P13010 732 aaKnown RBP9.17□□□□□ -0.94
PRKDC-205ENST00000535375 CCDC27Q2M243 656 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 RPS26P11Q5JNZ5 115 aaPredicted RBP9.17□□□□□ -0.94
PRKDC-205ENST00000535375 NXPE4Q6UWF7 544 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 MEGF10Q96KG7 1140 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 WWC3Q9ULE0 1092 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 SPG7Q9UQ90 795 aa9.17□□□□□ -0.94
PRKDC-205ENST00000535375 SART1O43290 800 aaKnown RBP9.16□□□□□ -0.94
PRKDC-205ENST00000535375 DZIP1LQ8IYY4 767 aaKnown RBP9.16□□□□□ -0.94
PRKDC-205ENST00000535375 GLIS3Q8NEA6 775 aa9.16□□□□□ -0.94
PRKDC-205ENST00000535375 SSBP4Q9BWG4 385 aaPredicted RBP9.16□□□□□ -0.94
PRKDC-205ENST00000535375 AKAP2Q9Y2D5 859 aa9.16□□□□□ -0.94
PRKDC-205ENST00000535375 GIPC1O14908 333 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 B3GALT4O96024 378 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 COL19A1Q14993 1142 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 EAPPQ56P03 285 aaPredicted RBP9.15□□□□□ -0.94
PRKDC-205ENST00000535375 NUTM2GQ5VZR2 741 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 FDX2Q6P4F2 183 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 SETDB2Q96T68 719 aa9.15□□□□□ -0.94
PRKDC-205ENST00000535375 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
PRKDC-205ENST00000535375 RSPO4Q2I0M5 234 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms