RNA–Protein interactions for RNA: ENST00000534775.1

PTPMT1-205, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-205ENST00000534775 HSPD1P10809 573 aaKnown RBP28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 PDE6AP16499 860 aa28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 ANO8Q9HCE9 1232 aaPredicted RBP28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 ZSWIM6Q9HCJ5 1215 aa28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 CYP46A1Q9Y6A2 500 aa28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 ZBTB22O15209 634 aa28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 CHMP5Q9NZZ3 219 aa28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 PDS5AQ29RF7 1337 aaKnown RBP28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 RPAP1Q9BWH6 1393 aaPredicted RBP28.43■■■□□ 2.14
PTPMT1-205ENST00000534775 HIBADHP31937 336 aaKnown RBP28.42■■■□□ 2.14
PTPMT1-205ENST00000534775 PDE6BP35913 854 aa28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 ADCK5Q3MIX3 580 aa28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 TTC14Q96N46 770 aa28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 PUS7LQ9H0K6 701 aaKnown RBP28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 ZNF532Q9HCE3 1301 aa28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 CIZ1Q9ULV3 898 aaPredicted RBP28.41■■■□□ 2.14
PTPMT1-205ENST00000534775 WTIPA6NIX2 430 aaPredicted RBP28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 RUFY3Q7L099 469 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 CTNNA3Q9UI47 895 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 WWC3Q9ULE0 1092 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 TCRBV5S4A2TA0A5A2 114 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 GPAA1O43292 621 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 VPS53Q5VIR6 699 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 LRP2BPQ9P2M1 347 aa28.4■■■□□ 2.14
PTPMT1-205ENST00000534775 LRRC37AA6NMS7 1700 aa28.39■■■□□ 2.14
PTPMT1-205ENST00000534775 DDIT3P35638 169 aa28.39■■■□□ 2.13
PTPMT1-205ENST00000534775 DEFB132Q7Z7B7 95 aa28.39■■■□□ 2.13
PTPMT1-205ENST00000534775 TMX3Q96JJ7 454 aa28.39■■■□□ 2.13
PTPMT1-205ENST00000534775 PDRG1Q9NUG6 133 aa28.39■■■□□ 2.13
PTPMT1-205ENST00000534775 FRAT2O75474 233 aaPredicted RBP28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 NPR1P16066 1061 aa28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 MSL1Q68DK7 614 aa28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 BLOC1S2Q6QNY1 142 aa28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 C15orf52Q6ZUT6 534 aaKnown RBP28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 MAGEB6Q8N7X4 407 aa28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 ANP32EQ9BTT0 268 aa28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 IQSEC3Q9UPP2 1182 aaPredicted RBP28.38■■■□□ 2.13
PTPMT1-205ENST00000534775 IRS2Q9Y4H2 1338 aa28.37■■■□□ 2.13
PTPMT1-205ENST00000534775 ATP2B4P23634 1241 aa28.37■■■□□ 2.13
PTPMT1-205ENST00000534775 KLRK1P26718 216 aa28.37■■■□□ 2.13
PTPMT1-205ENST00000534775 CCDC125Q86Z20 511 aa28.37■■■□□ 2.13
PTPMT1-205ENST00000534775 COL1A1P02452 1464 aaPredicted RBP28.37■■■□□ 2.13
PTPMT1-205ENST00000534775 CYP21A2P08686 494 aa28.36■■■□□ 2.13
PTPMT1-205ENST00000534775 SRGNP10124 158 aa28.36■■■□□ 2.13
PTPMT1-205ENST00000534775 GPSM2P81274 684 aa28.36■■■□□ 2.13
PTPMT1-205ENST00000534775 AIDAQ96BJ3 306 aa28.36■■■□□ 2.13
PTPMT1-205ENST00000534775 CWC22Q9HCG8 908 aaKnown RBP28.36■■■□□ 2.13
PTPMT1-205ENST00000534775 ALDH1B1P30837 517 aa28.35■■■□□ 2.13
PTPMT1-205ENST00000534775 AK2P54819 239 aa28.35■■■□□ 2.13
PTPMT1-205ENST00000534775 FOXD4L1Q9NU39 408 aa28.35■■■□□ 2.13
PTPMT1-205ENST00000534775 PODXL2Q9NZ53 605 aa28.35■■■□□ 2.13
PTPMT1-205ENST00000534775 GGA1Q9UJY5 639 aa28.35■■■□□ 2.13
PTPMT1-205ENST00000534775 PPEF1O14829 653 aaPredicted RBP28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 CUL4AQ13619 759 aa28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 ZNF804AQ7Z570 1209 aa28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 SP8Q8IXZ3 490 aa28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 ABCF2Q9UG63 623 aa28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 NSFL1CQ9UNZ2 370 aaKnown RBP28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 LIMCH1Q9UPQ0 1083 aa28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 COL11A2P13942 1736 aaPredicted RBP28.34■■■□□ 2.13
PTPMT1-205ENST00000534775 RPS6KB1P23443 525 aa28.33■■■□□ 2.13
PTPMT1-205ENST00000534775 NEK1Q96PY6 1258 aa28.33■■■□□ 2.13
PTPMT1-205ENST00000534775 ALDH8A1Q9H2A2 487 aaPredicted RBP28.33■■■□□ 2.13
PTPMT1-205ENST00000534775 HMGB1P09429 215 aaKnown RBP28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 CPA1P15085 419 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 ANKRD1Q15327 319 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 NOL8Q76FK4 1167 aaKnown RBP28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 MASTLQ96GX5 879 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 RAI14Q9P0K7 980 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 IGSF3O75054 1194 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 UFL1O94874 794 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 IMMTQ16891 758 aaKnown RBP28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 TMED8Q6PL24 325 aaPredicted RBP28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 INTS4Q96HW7 963 aaKnown RBP28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 TAF6LQ9Y6J9 622 aa28.32■■■□□ 2.12
PTPMT1-205ENST00000534775 TXNRD3Q86VQ6 643 aa28.31■■■□□ 2.12
PTPMT1-205ENST00000534775 ZSCAN31Q96LW9 406 aaPredicted RBP28.31■■■□□ 2.12
PTPMT1-205ENST00000534775 STRBPQ96SI9 672 aaKnown RBP28.31■■■□□ 2.12
PTPMT1-205ENST00000534775 ATP6V0A2Q9Y487 856 aa28.31■■■□□ 2.12
PTPMT1-205ENST00000534775 LTBP1Q14766 1721 aa28.31■■■□□ 2.12
PTPMT1-205ENST00000534775 MAST2Q6P0Q8 1798 aa28.3■■■□□ 2.12
PTPMT1-205ENST00000534775 FOXP2O15409 715 aa28.3■■■□□ 2.12
PTPMT1-205ENST00000534775 GNAT2P19087 354 aa28.3■■■□□ 2.12
PTPMT1-205ENST00000534775 FGAP02671 866 aa28.29■■■□□ 2.12
PTPMT1-205ENST00000534775 ZGPATQ8N5A5 531 aaKnown RBP28.29■■■□□ 2.12
PTPMT1-205ENST00000534775 MBD4O95243 580 aa28.29■■■□□ 2.12
PTPMT1-205ENST00000534775 CYP7A1P22680 504 aa28.29■■■□□ 2.12
PTPMT1-205ENST00000534775 LAMA4Q16363 1823 aa28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 CACNA1SQ13698 1873 aa28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 ZMYM6O95789 1325 aa28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 CCDC88AQ3V6T2 1871 aa28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 SPTY2D1Q68D10 685 aaPredicted RBP28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 TDRD7Q8NHU6 1098 aaKnown RBP28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 TMX4Q9H1E5 349 aaPredicted RBP28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 DUOX1Q9NRD9 1551 aa28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 SH2B1Q9NRF2 756 aaPredicted RBP28.28■■■□□ 2.12
PTPMT1-205ENST00000534775 APPP05067 770 aa28.27■■■□□ 2.12
PTPMT1-205ENST00000534775 CHAF1AQ13111 956 aaPredicted RBP28.27■■■□□ 2.12
PTPMT1-205ENST00000534775 ALX1Q15699 326 aa28.27■■■□□ 2.12
PTPMT1-205ENST00000534775 PATL2C9JE40 543 aaKnown RBP28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms