RNA–Protein interactions for RNA: ENST00000533957.1

CLNS1A-212, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 4

Gene CLNS1A, Length 369 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-212ENST00000533957 HOXD8P13378 290 aaPredicted RBP7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 SOX18P35713 384 aa7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 SRPK2P78362 688 aaKnown RBP7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 GDF6Q6KF10 455 aaPredicted RBP7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 C16orf46Q6P387 395 aa7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 NSUN5Q96P11 429 aaKnown RBP7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 NEO1Q92859 1461 aa7.92□□□□□ -1.14
CLNS1A-212ENST00000533957 HYAL3O43820 417 aaPredicted RBP7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 LRP8Q14114 963 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 FAM26DQ5JW98 314 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 CAPN12Q6ZSI9 719 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 TMEM130Q8N3G9 435 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 COL26A1Q96A83 441 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 MEGF10Q96KG7 1140 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 KTN1Q86UP2 1357 aaKnown RBP7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 ABCC1P33527 1531 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 ZMYM4Q5VZL5 1548 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 ARHGEF40Q8TER5 1519 aa7.91□□□□□ -1.14
CLNS1A-212ENST00000533957 SAMD9LQ8IVG5 1584 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 RPRD2Q5VT52 1461 aaKnown RBP7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 COL17A1Q9UMD9 1497 aaPredicted RBP7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 PTPRKQ15262 1439 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 ROCK2O75116 1388 aaKnown RBP7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 NBPF11Q86T75 865 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 DZIP1LQ8IYY4 767 aaKnown RBP7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 STK32AQ8WU08 396 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 RBSNQ9H1K0 784 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 AKTIPQ9H8T0 292 aa7.9□□□□□ -1.14
CLNS1A-212ENST00000533957 KDM5CP41229 1560 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 FANCAO15360 1455 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 ALX3O95076 343 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 SETDB1Q15047 1291 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 TRIP4Q15650 581 aaPredicted RBP7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 PIK3R5Q8WYR1 880 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 MRPL18Q9H0U6 180 aaKnown RBP7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 SIGLEC1Q9BZZ2 1709 aa7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 DNMT1P26358 1616 aaKnown RBP7.89□□□□□ -1.15
CLNS1A-212ENST00000533957 ADGRL2O95490 1459 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 DAPK1P53355 1430 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 ANKRD30BQ9BXX2 1392 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 ANKRD30AQ9BXX3 1397 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 PLEKHD1A6NEE1 506 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 UBAP1LF5GYI3 381 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 TNFRSF10BO14763 440 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 NAA30Q147X3 362 aaPredicted RBP7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 PRR23CQ6ZRP0 262 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 CACTIN-AS1Q8N1I8 211 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 SRA1Q9HD15 236 aaKnown RBP7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 CXXC1Q9P0U4 656 aaPredicted RBP7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 TRIM33Q9UPN9 1127 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 CROCC2H7BZ55 1655 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 HECW2Q9P2P5 1572 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 ARHGAP5Q13017 1502 aa7.88□□□□□ -1.15
CLNS1A-212ENST00000533957 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 F8W735 103 aaPredicted RBP7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 ATG7O95352 703 aa7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 MAP4K3Q8IVH8 894 aa7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 MKNK1Q9BUB5 465 aa7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 FAM13BQ9NYF5 915 aa7.87□□□□□ -1.15
CLNS1A-212ENST00000533957 PLCH2O75038 1416 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 INO80Q9ULG1 1556 aaPredicted RBP7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 COL13A1Q5TAT6 717 aaPredicted RBP7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 MUC3BQ9H195 1237 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 CFDP1Q9UEE9 299 aaPredicted RBP7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 RNF112Q9ULX5 631 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 PPME1Q9Y570 386 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 ABCC5O15440 1437 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 NCOA1Q15788 1441 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 ADGBQ8N7X0 1667 aa7.86□□□□□ -1.15
CLNS1A-212ENST00000533957 ABCA6Q8N139 1617 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 KIDINS220Q9ULH0 1771 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 SYCP2Q9BX26 1530 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 PTCD1O75127 700 aaKnown RBP7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 TSPY4P0CV99 314 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 TSPY10P0CW01 314 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 ZAP70P43403 619 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 TMEM164Q5U3C3 297 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 SLC51AQ86UW1 340 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 DCAF11Q8TEB1 546 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 KRTAP9-2Q9BYQ4 174 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 FNDC3AQ9Y2H6 1198 aaKnown RBP7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 ADGRL1O94910 1474 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 POGZQ7Z3K3 1410 aa7.85□□□□□ -1.15
CLNS1A-212ENST00000533957 WASHC2AQ641Q2 1341 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 WASHC2CQ9Y4E1 1318 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 ZBTB39O15060 712 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 HYAL2Q12891 473 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 TTC39BQ5VTQ0 682 aaPredicted RBP7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 GPR152Q8TDT2 470 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 STIM2Q9P246 746 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 CNTLNQ9NXG0 1405 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 DIP2CQ9Y2E4 1556 aa7.84□□□□□ -1.15
CLNS1A-212ENST00000533957 BCORL1Q5H9F3 1711 aa7.83□□□□□ -1.16
CLNS1A-212ENST00000533957 ZFYVE16Q7Z3T8 1539 aa7.83□□□□□ -1.16
CLNS1A-212ENST00000533957 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
CLNS1A-212ENST00000533957 HSPA5P11021 654 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms