RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CAVIN4Q5BKX8 364 aa16.6■□□□□ 0.25
CMTM1-219ENST00000533953 CNTROBQ8N137 903 aa16.6■□□□□ 0.25
CMTM1-219ENST00000533953 SCAF8Q9UPN6 1271 aaKnown RBP16.6■□□□□ 0.25
CMTM1-219ENST00000533953 PCDHAC2Q9Y5I4 1007 aa16.6■□□□□ 0.25
CMTM1-219ENST00000533953 A0A1B0GUL6 1792 aa16.59■□□□□ 0.25
CMTM1-219ENST00000533953 TRAF5O00463 557 aa16.59■□□□□ 0.25
CMTM1-219ENST00000533953 ITGBL1O95965 494 aaPredicted RBP16.59■□□□□ 0.25
CMTM1-219ENST00000533953 PHKA1P46020 1223 aa16.59■□□□□ 0.25
CMTM1-219ENST00000533953 ZNF280AP59817 542 aaPredicted RBP16.59■□□□□ 0.25
CMTM1-219ENST00000533953 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
CMTM1-219ENST00000533953 NEUROD6Q96NK8 337 aa16.59■□□□□ 0.25
CMTM1-219ENST00000533953 EXOC6BQ9Y2D4 811 aa16.59■□□□□ 0.25
CMTM1-219ENST00000533953 A0A1B0GUL7 405 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 FRAT2O75474 233 aaPredicted RBP16.58■□□□□ 0.24
CMTM1-219ENST00000533953 KIF4BQ2VIQ3 1234 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 CRBNQ96SW2 442 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 GLIS2Q9BZE0 524 aaPredicted RBP16.58■□□□□ 0.24
CMTM1-219ENST00000533953 BCL11AQ9H165 835 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 MYOZ2Q9NPC6 264 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 SCN4AP35499 1836 aa16.58■□□□□ 0.24
CMTM1-219ENST00000533953 FAM205AQ6ZU69 1335 aa16.57■□□□□ 0.24
CMTM1-219ENST00000533953 APBB1O00213 710 aa16.57■□□□□ 0.24
CMTM1-219ENST00000533953 SCARF1Q14162 830 aa16.57■□□□□ 0.24
CMTM1-219ENST00000533953 XAGE2Q96GT9 111 aa16.57■□□□□ 0.24
CMTM1-219ENST00000533953 NOP58Q9Y2X3 529 aaKnown RBP16.57■□□□□ 0.24
CMTM1-219ENST00000533953 NBPF9Q3BBW0 867 aa16.56■□□□□ 0.24
CMTM1-219ENST00000533953 MFSD14BQ5SR56 506 aa16.56■□□□□ 0.24
CMTM1-219ENST00000533953 CCDC102BQ68D86 513 aa16.56■□□□□ 0.24
CMTM1-219ENST00000533953 USP48Q86UV5 1035 aa16.56■□□□□ 0.24
CMTM1-219ENST00000533953 PGAP2Q9UHJ9 254 aa16.56■□□□□ 0.24
CMTM1-219ENST00000533953 SUPT16HQ9Y5B9 1047 aaKnown RBP16.56■□□□□ 0.24
CMTM1-219ENST00000533953 AOX1Q06278 1338 aa16.55■□□□□ 0.24
CMTM1-219ENST00000533953 RPAP2Q8IXW5 612 aaPredicted RBP16.55■□□□□ 0.24
CMTM1-219ENST00000533953 OGFOD1Q8N543 542 aa16.55■□□□□ 0.24
CMTM1-219ENST00000533953 MYO3BQ8WXR4 1341 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 PASKQ96RG2 1323 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 ADM5C9JUS6 153 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
CMTM1-219ENST00000533953 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 AKAP2Q9Y2D5 859 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
CMTM1-219ENST00000533953 APLP1P51693 650 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 TNNI3KQ59H18 835 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 DBNDD2Q9BQY9 259 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 CCDC8Q9H0W5 538 aaPredicted RBP16.53■□□□□ 0.24
CMTM1-219ENST00000533953 IL1RAPL2Q9NP60 686 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 TLR7Q9NYK1 1049 aaKnown RBP16.53■□□□□ 0.24
CMTM1-219ENST00000533953 TTF2Q9UNY4 1162 aaKnown RBP16.53■□□□□ 0.24
CMTM1-219ENST00000533953 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 FPGT-TNNI3KV9GXZ4 949 aa16.53■□□□□ 0.24
CMTM1-219ENST00000533953 COL1A1P02452 1464 aaPredicted RBP16.53■□□□□ 0.24
CMTM1-219ENST00000533953 WNT10BO00744 389 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 FKBP1AP62942 108 aaKnown RBP16.52■□□□□ 0.24
CMTM1-219ENST00000533953 CFAP100Q494V2 611 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 GORABQ5T7V8 394 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 PRAMEF18Q5VWM3 479 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 PI16Q6UXB8 463 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 ZC3H15Q8WU90 426 aaKnown RBP16.52■□□□□ 0.24
CMTM1-219ENST00000533953 EAF2Q96CJ1 260 aaPredicted RBP16.52■□□□□ 0.24
CMTM1-219ENST00000533953 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
CMTM1-219ENST00000533953 HDAC9Q9UKV0 1011 aa16.52■□□□□ 0.24
CMTM1-219ENST00000533953 ZNF609O15014 1411 aa16.52■□□□□ 0.23
CMTM1-219ENST00000533953 RBM5P52756 815 aaKnown RBP eCLIP16.51■□□□□ 0.23
CMTM1-219ENST00000533953 RASGRF1Q13972 1273 aa16.51■□□□□ 0.23
CMTM1-219ENST00000533953 CST9Q5W186 159 aa16.51■□□□□ 0.23
CMTM1-219ENST00000533953 KRT26Q7Z3Y9 468 aa16.51■□□□□ 0.23
CMTM1-219ENST00000533953 DCPSQ96C86 337 aaKnown RBP16.51■□□□□ 0.23
CMTM1-219ENST00000533953 PRMT6Q96LA8 375 aaPredicted RBP16.51■□□□□ 0.23
CMTM1-219ENST00000533953 ZNF408Q9H9D4 720 aa16.51■□□□□ 0.23
CMTM1-219ENST00000533953 GNL3LQ9NVN8 582 aaKnown RBP16.51■□□□□ 0.23
CMTM1-219ENST00000533953 ZNF646O15015 1829 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-219ENST00000533953 HMMRO75330 724 aa16.5■□□□□ 0.23
CMTM1-219ENST00000533953 IRX6P78412 446 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-219ENST00000533953 DLGAP5Q15398 846 aa16.5■□□□□ 0.23
CMTM1-219ENST00000533953 CDC37L1Q7L3B6 337 aa16.5■□□□□ 0.23
CMTM1-219ENST00000533953 RHPN1Q8TCX5 695 aa16.5■□□□□ 0.23
CMTM1-219ENST00000533953 ZBED3Q96IU2 234 aaPredicted RBP16.5■□□□□ 0.23
CMTM1-219ENST00000533953 SNRKQ9NRH2 765 aa16.5■□□□□ 0.23
CMTM1-219ENST00000533953 CLRN2A0PK11 232 aa16.49■□□□□ 0.23
CMTM1-219ENST00000533953 SMARCA5O60264 1052 aaPredicted RBP16.49■□□□□ 0.23
CMTM1-219ENST00000533953 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
CMTM1-219ENST00000533953 GPR108Q9NPR9 543 aa16.49■□□□□ 0.23
CMTM1-219ENST00000533953 HMG20BQ9P0W2 317 aa16.49■□□□□ 0.23
CMTM1-219ENST00000533953 DBNLQ9UJU6 430 aaKnown RBP16.49■□□□□ 0.23
CMTM1-219ENST00000533953 PSME4Q14997 1843 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 CELF2O95319 508 aaKnown RBP16.48■□□□□ 0.23
CMTM1-219ENST00000533953 PRDX5P30044 214 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 CRKP46108 304 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 AACSQ86V21 672 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 DNAJC5GQ8N7S2 189 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 EXOC6Q8TAG9 804 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 WDR66Q8TBY9 1149 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 TBC1D22AQ8WUA7 517 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 DENND2AQ9ULE3 1009 aa16.48■□□□□ 0.23
CMTM1-219ENST00000533953 SPDYE2BA6NHP3 402 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 TMEM88BA6NKF7 163 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 SPDYE6P0CI01 402 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 MCAMP43121 646 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 DIXDC1Q155Q3 683 aa16.47■□□□□ 0.23
CMTM1-219ENST00000533953 ERC1Q8IUD2 1116 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms