RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 EIF5P55010 431 aaKnown RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 KRT32Q14532 448 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 TTC5Q8N0Z6 440 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 TDRD7Q8NHU6 1098 aaKnown RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 XAGE2Q96GT9 111 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 GIMAP6Q6P9H5 292 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 ZNF384Q8TF68 577 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 LETM1O95202 739 aaPredicted RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 ADD2P35612 726 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 FTOQ9C0B1 505 aaKnown RBP eCLIP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 GREM2Q9H772 168 aa8.49□□□□□ -1.05
RNPC3-209ENST00000533834 EPB41L4AQ9HCS5 686 aaPredicted RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 PIH1D3Q9NQM4 214 aaKnown RBP8.49□□□□□ -1.05
RNPC3-209ENST00000533834 LHX8Q68G74 356 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 DHX40Q8IX18 779 aaKnown RBP8.48□□□□□ -1.05
RNPC3-209ENST00000533834 PIBF1Q8WXW3 757 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 SPATA31A1Q5TZJ5 1347 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 KIF28PB7ZC32 967 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 GOLIM4O00461 696 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 SARM1Q6SZW1 724 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 KIAA1211Q6ZU35 1233 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 TBC1D10CQ8IV04 446 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 FMR1NBQ8N0W7 255 aaPredicted RBP8.48□□□□□ -1.05
RNPC3-209ENST00000533834 BRF1Q92994 677 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 ARXQ96QS3 562 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 MAP3K14Q99558 947 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 ZBTB3Q9H5J0 574 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 CTSWP56202 376 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 AXDND1Q5T1B0 1012 aaPredicted RBP8.48□□□□□ -1.05
RNPC3-209ENST00000533834 KIAA1524Q8TCG1 905 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 SENP2Q9HC62 589 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 USP25Q9UHP3 1055 aa8.48□□□□□ -1.05
RNPC3-209ENST00000533834 CAMTA2O94983 1202 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 FGAP02671 866 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ZKSCAN1P17029 563 aaPredicted RBP8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ZAP70P43403 619 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ALX1Q15699 326 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 CYB5R4Q7L1T6 521 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ZNF710Q8N1W2 664 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 IGDCC4Q8TDY8 1250 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 MORC2Q9Y6X9 1032 aaPredicted RBP8.47□□□□□ -1.05
RNPC3-209ENST00000533834 OS9Q13438 667 aaPredicted RBP8.47□□□□□ -1.05
RNPC3-209ENST00000533834 NBPF11Q86T75 865 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 AK7Q96M32 723 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 HPSEQ9Y251 543 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ADAMTSL1Q8N6G6 1762 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 BRWD3Q6RI45 1802 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 MROH7-TTC4A0A0A0MT08 1334 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 NTSR2O95665 410 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 HMGB1P09429 215 aaKnown RBP8.47□□□□□ -1.05
RNPC3-209ENST00000533834 APOBRQ0VD83 1088 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 PTPAQ15257 358 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 LARP1BQ659C4 914 aaKnown RBP8.47□□□□□ -1.05
RNPC3-209ENST00000533834 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 ZBTB1Q9Y2K1 713 aa8.47□□□□□ -1.05
RNPC3-209ENST00000533834 FGRP09769 529 aa8.46□□□□□ -1.05
RNPC3-209ENST00000533834 CDC25BP30305 580 aa8.46□□□□□ -1.05
RNPC3-209ENST00000533834 TOM1L2Q6ZVM7 507 aa8.46□□□□□ -1.05
RNPC3-209ENST00000533834 FAM89AQ96GI7 184 aa8.46□□□□□ -1.05
RNPC3-209ENST00000533834 PRDM11Q9NQV5 511 aa8.46□□□□□ -1.05
RNPC3-209ENST00000533834 PTPDC1A2A3K4 754 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 FIBPO43427 364 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 RANBP6O60518 1105 aaKnown RBP8.46□□□□□ -1.06
RNPC3-209ENST00000533834 ADCY5O95622 1261 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 RNF20Q5VTR2 975 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 CBX8Q9HC52 389 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 RTEL1Q9NZ71 1219 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 CCDC39Q9UFE4 941 aa8.46□□□□□ -1.06
RNPC3-209ENST00000533834 COL11A2P13942 1736 aaPredicted RBP8.46□□□□□ -1.06
RNPC3-209ENST00000533834 RBBP6Q7Z6E9 1792 aaKnown RBP8.46□□□□□ -1.06
RNPC3-209ENST00000533834 IL6STP40189 918 aaPredicted RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 TYRO3Q06418 890 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 ITPK1Q13572 414 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 APPBP2Q92624 585 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 USP28Q96RU2 1077 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 LRRC2Q9BYS8 371 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 ZSCAN16Q9H4T2 348 aaPredicted RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 PYCARDQ9ULZ3 195 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 NCAPHQ15003 741 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 DDX11Q96FC9 970 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 SH2B2O14492 632 aaPredicted RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 PDE8BO95263 885 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 UBE3CQ15386 1083 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 ATL3Q6DD88 541 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 C11orf57Q6ZUT1 292 aaPredicted RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 SGMS1Q86VZ5 419 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 RNF214Q8ND24 703 aa8.45□□□□□ -1.06
RNPC3-209ENST00000533834 DNAJC2Q99543 621 aaKnown RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 NCOA5Q9HCD5 579 aaKnown RBP8.45□□□□□ -1.06
RNPC3-209ENST00000533834 RGL2O15211 777 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 MDM2Q00987 491 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 ADGRA1Q86SQ6 560 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 STRBPQ96SI9 672 aaKnown RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 TEX13AQ9BXU3 409 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 SCAND2PQ9GZW5 306 aaPredicted RBP8.44□□□□□ -1.06
RNPC3-209ENST00000533834 LY9Q9HBG7 655 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 DACT1Q9NYF0 836 aa8.44□□□□□ -1.06
RNPC3-209ENST00000533834 ARFGEF1Q9Y6D6 1849 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms