RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 GJA5P36382 358 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 CCT4P50991 539 aaKnown RBP14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 KIF22Q14807 665 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 TAF1CQ15572 869 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 RIC3Q7Z5B4 369 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 CCDC191Q8NCU4 936 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 SH3TC2Q8TF17 1288 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 CCDC85AQ96PX6 553 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 PRO3102Q9H379 93 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 BSDC1Q9NW68 430 aaPredicted RBP14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 MINPP1Q9UNW1 487 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 BRCA2P51587 3418 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 SSC5DA1L4H1 1573 aa14.47□□□□□ -0.09
TRAPPC4-213ENST00000533149 ZNF804BA4D1E1 1349 aa14.46□□□□□ -0.09
TRAPPC4-213ENST00000533149 PRMT2P55345 433 aa14.46□□□□□ -0.09
TRAPPC4-213ENST00000533149 KRT24Q2M2I5 525 aa14.46□□□□□ -0.09
TRAPPC4-213ENST00000533149 MTMR14Q8NCE2 650 aa14.46□□□□□ -0.09
TRAPPC4-213ENST00000533149 SZT2Q5T011 3432 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 CHL1O00533 1208 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 USP2O75604 605 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 GOLGA2Q08379 1002 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 NEUROD2Q15784 382 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 OPTNQ96CV9 577 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 MS4A4AQ96JQ5 239 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 LEMD3Q9Y2U8 911 aa14.45□□□□□ -0.1
TRAPPC4-213ENST00000533149 TMPOP42166 694 aaKnown RBP14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 GTF2A2P52657 109 aa14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 GTF2IP78347 998 aa14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 NBPF12Q5TAG4 269 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 CWC25Q9NXE8 425 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 ZNF646O15015 1829 aaPredicted RBP14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 CEP290O15078 2479 aa14.44□□□□□ -0.1
TRAPPC4-213ENST00000533149 CCL15-CCL14A0A0B4J2E2 113 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 LACTBP83111 547 aaPredicted RBP14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 CCL15Q16663 113 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 NCBP3Q53F19 620 aaKnown RBP14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 TXNRD3Q86VQ6 643 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 SHISA4Q96DD7 197 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 MYD88Q99836 296 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 ELP3Q9H9T3 547 aa14.43□□□□□ -0.1
TRAPPC4-213ENST00000533149 CTSWP56202 376 aa14.42□□□□□ -0.1
TRAPPC4-213ENST00000533149 VEZTQ9HBM0 779 aa14.42□□□□□ -0.1
TRAPPC4-213ENST00000533149 ZNF521Q96K83 1311 aa14.42□□□□□ -0.1
TRAPPC4-213ENST00000533149 CLRN2A0PK11 232 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 ZBTB7BO15156 539 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 TLR2O60603 784 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 GJA8P48165 433 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 TNFAIP1Q13829 316 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 UBE2Q1Q7Z7E8 422 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 ANKRD2Q9GZV1 360 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 ZCCHC17Q9NP64 241 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 LAS1LQ9Y4W2 734 aaKnown RBP14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 SPDYE2BA6NHP3 402 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 GJB1P08034 283 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 SPDYE6P0CI01 402 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 RASA3Q14644 834 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 MTFR1Q15390 333 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 CCDC27Q2M243 656 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 CFAP100Q494V2 611 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 GPR153Q6NV75 609 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 WWC1Q8IX03 1113 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 FAM43AQ8N2R8 423 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 HELBQ8NG08 1087 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 TTLL11Q8NHH1 800 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 JARID2Q92833 1246 aaPredicted RBP14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 CDCA7LQ96GN5 454 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 ARHGAP39Q9C0H5 1083 aa14.41□□□□□ -0.1
TRAPPC4-213ENST00000533149 SOX1O00570 391 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 HOXD10P28358 340 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 IGHMBP2P38935 993 aaKnown RBP14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 DUSP27Q5VZP5 1158 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 LRCH3Q96II8 777 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 PRMT6Q96LA8 375 aaPredicted RBP14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 GREM2Q9H772 168 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 CD209Q9NNX6 404 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 TRIM35Q9UPQ4 493 aa14.4□□□□□ -0.1
TRAPPC4-213ENST00000533149 ECM29Q5VYK3 1845 aa14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 CETPP11597 493 aa14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 KCNJ4P48050 445 aa14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 CERS5Q8N5B7 392 aa14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 METTL22Q9BUU2 404 aaPredicted RBP14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 CSADQ9Y600 493 aa14.39□□□□□ -0.11
TRAPPC4-213ENST00000533149 F8W031 263 aaPredicted RBP14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 EVI5O60447 810 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 DDX58O95786 925 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 CCL5P13501 91 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 KLRK1P26718 216 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 GRK4P32298 578 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 RBM5P52756 815 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 FKBP1AP62942 108 aaKnown RBP14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 MAP3K9P80192 1104 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 VGLL4Q14135 290 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 WDR63Q8IWG1 891 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 RAET1EQ8TD07 263 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 TRIM47Q96LD4 638 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 SRRDQ9UH36 339 aa14.38□□□□□ -0.11
TRAPPC4-213ENST00000533149 PCDHAC2Q9Y5I4 1007 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms