RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
SMPD1-208ENST00000533123 ZC3H12CQ9C0D7 883 aaKnown RBP22.35■■□□□ 1.17
SMPD1-208ENST00000533123 FRAT2O75474 233 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-208ENST00000533123 WASHC4Q2M389 1173 aa22.34■■□□□ 1.17
SMPD1-208ENST00000533123 CYP2E1P05181 493 aaPredicted RBP22.34■■□□□ 1.17
SMPD1-208ENST00000533123 BECN1Q14457 450 aa22.34■■□□□ 1.17
SMPD1-208ENST00000533123 ZNF804AQ7Z570 1209 aa22.34■■□□□ 1.17
SMPD1-208ENST00000533123 FSD1Q9BTV5 496 aa22.34■■□□□ 1.17
SMPD1-208ENST00000533123 IL25Q9H293 177 aa22.34■■□□□ 1.17
SMPD1-208ENST00000533123 EIF5BO60841 1220 aaKnown RBP22.33■■□□□ 1.17
SMPD1-208ENST00000533123 REC8O95072 547 aa22.33■■□□□ 1.17
SMPD1-208ENST00000533123 RTFDC1Q9BY42 306 aaPredicted RBP22.33■■□□□ 1.17
SMPD1-208ENST00000533123 RTKN2Q8IZC4 609 aa22.33■■□□□ 1.16
SMPD1-208ENST00000533123 EYA3Q99504 573 aa22.32■■□□□ 1.16
SMPD1-208ENST00000533123 SYT17Q9BSW7 474 aa22.32■■□□□ 1.16
SMPD1-208ENST00000533123 CD209Q9NNX6 404 aa22.32■■□□□ 1.16
SMPD1-208ENST00000533123 KBTBD3Q8NAB2 608 aa22.31■■□□□ 1.16
SMPD1-208ENST00000533123 COL1A1P02452 1464 aaPredicted RBP22.31■■□□□ 1.16
SMPD1-208ENST00000533123 DENND2AQ9ULE3 1009 aa22.31■■□□□ 1.16
SMPD1-208ENST00000533123 JAG2Q9Y219 1238 aa22.31■■□□□ 1.16
SMPD1-208ENST00000533123 DOK7Q18PE1 504 aa22.3■■□□□ 1.16
SMPD1-208ENST00000533123 GRIPAP1Q4V328 841 aa22.3■■□□□ 1.16
SMPD1-208ENST00000533123 SOGA3Q5TF21 947 aa22.3■■□□□ 1.16
SMPD1-208ENST00000533123 TDRD7Q8NHU6 1098 aaKnown RBP22.3■■□□□ 1.16
SMPD1-208ENST00000533123 SEMA3EO15041 775 aa22.3■■□□□ 1.16
SMPD1-208ENST00000533123 CHGBP05060 677 aa22.3■■□□□ 1.16
SMPD1-208ENST00000533123 PIH1D3Q9NQM4 214 aaKnown RBP22.3■■□□□ 1.16
SMPD1-208ENST00000533123 CHAF1AQ13111 956 aaPredicted RBP22.29■■□□□ 1.16
SMPD1-208ENST00000533123 IL1R1P14778 569 aa22.29■■□□□ 1.16
SMPD1-208ENST00000533123 AOC3Q16853 763 aa22.29■■□□□ 1.16
SMPD1-208ENST00000533123 SUPT20HQ8NEM7 779 aa22.29■■□□□ 1.16
SMPD1-208ENST00000533123 TTF1Q15361 905 aaPredicted RBP22.28■■□□□ 1.16
SMPD1-208ENST00000533123 PSMD1Q99460 953 aa22.28■■□□□ 1.16
SMPD1-208ENST00000533123 COA1Q9GZY4 146 aa22.28■■□□□ 1.16
SMPD1-208ENST00000533123 ANO2Q9NQ90 1003 aa22.28■■□□□ 1.16
SMPD1-208ENST00000533123 G3V3G9 751 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 DCAF8Q5TAQ9 597 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 MYH13Q9UKX3 1938 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 MYO5AQ9Y4I1 1855 aaKnown RBP22.27■■□□□ 1.16
SMPD1-208ENST00000533123 SLFNL1Q499Z3 407 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 CWC27Q6UX04 472 aaKnown RBP22.27■■□□□ 1.16
SMPD1-208ENST00000533123 DBNDD1Q9H9R9 158 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 ZNF277Q9NRM2 450 aaPredicted RBP22.27■■□□□ 1.16
SMPD1-208ENST00000533123 DIAPH3Q9NSV4 1193 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 ABCF2Q9UG63 623 aa22.27■■□□□ 1.16
SMPD1-208ENST00000533123 IDH1O75874 414 aaKnown RBP22.26■■□□□ 1.15
SMPD1-208ENST00000533123 KIAA2012Q0VF49 1180 aa22.26■■□□□ 1.15
SMPD1-208ENST00000533123 PPIP5K2O43314 1243 aa22.26■■□□□ 1.15
SMPD1-208ENST00000533123 CHD4Q14839 1912 aa22.26■■□□□ 1.15
SMPD1-208ENST00000533123 CD2BP2O95400 341 aaKnown RBP22.25■■□□□ 1.15
SMPD1-208ENST00000533123 FAM227BQ96M60 508 aa22.25■■□□□ 1.15
SMPD1-208ENST00000533123 LRP2BPQ9P2M1 347 aa22.25■■□□□ 1.15
SMPD1-208ENST00000533123 SGSM2O43147 1006 aa22.24■■□□□ 1.15
SMPD1-208ENST00000533123 NMIQ13287 307 aaPredicted RBP22.24■■□□□ 1.15
SMPD1-208ENST00000533123 TAOK3Q9H2K8 898 aa22.24■■□□□ 1.15
SMPD1-208ENST00000533123 PDS5AQ29RF7 1337 aaKnown RBP22.24■■□□□ 1.15
SMPD1-208ENST00000533123 NFKBIEO00221 500 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 HIP1O00291 1037 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 ZBTB22O15209 634 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 HSCBQ8IWL3 235 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 GTF2IP78347 998 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 SLC9C2Q5TAH2 1124 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 KCNQ5Q9NR82 932 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 FER1L6Q2WGJ9 1857 aa22.23■■□□□ 1.15
SMPD1-208ENST00000533123 A0A0D9SFI3 127 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 RNF113AO15541 343 aaKnown RBP22.22■■□□□ 1.15
SMPD1-208ENST00000533123 ECE2O60344 883 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 PODNQ7Z5L7 613 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 SPRYD3Q8NCJ5 442 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 WDR66Q8TBY9 1149 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 SNX21Q969T3 373 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.22■■□□□ 1.15
SMPD1-208ENST00000533123 ARFGEF1Q9Y6D6 1849 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 MAP3K12Q12852 859 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 LARGE2Q8N3Y3 721 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 FBXW7Q969H0 707 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 RFX7Q2KHR2 1363 aa22.22■■□□□ 1.15
SMPD1-208ENST00000533123 SEC62Q99442 399 aaKnown RBP22.21■■□□□ 1.15
SMPD1-208ENST00000533123 SLKQ9H2G2 1235 aaPredicted RBP22.21■■□□□ 1.15
SMPD1-208ENST00000533123 RAI14Q9P0K7 980 aa22.21■■□□□ 1.15
SMPD1-208ENST00000533123 PRDX5P30044 214 aa22.21■■□□□ 1.15
SMPD1-208ENST00000533123 LRRFIP1Q32MZ4 808 aaKnown RBP22.21■■□□□ 1.15
SMPD1-208ENST00000533123 PALD1Q9ULE6 856 aa22.21■■□□□ 1.15
SMPD1-208ENST00000533123 ADD2P35612 726 aa22.2■■□□□ 1.14
SMPD1-208ENST00000533123 IARSP41252 1262 aaKnown RBP22.2■■□□□ 1.14
SMPD1-208ENST00000533123 TTLL5Q6EMB2 1281 aa22.2■■□□□ 1.14
SMPD1-208ENST00000533123 MAGEB6Q8N7X4 407 aa22.2■■□□□ 1.14
SMPD1-208ENST00000533123 DOCK2Q92608 1830 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 ZFYP08048 801 aaPredicted RBP22.19■■□□□ 1.14
SMPD1-208ENST00000533123 PDE6AP16499 860 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 RASSF7Q02833 373 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 RABEP1Q15276 862 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 ZSCAN25Q6NSZ9 544 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 RUFY2Q8WXA3 655 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 MYH7P12883 1935 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 FAM205AQ6ZU69 1335 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 SALL1Q9NSC2 1324 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 GRIK5Q16478 980 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 MFSD14BQ5SR56 506 aa22.19■■□□□ 1.14
SMPD1-208ENST00000533123 TICAM2Q86XR7 235 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms