RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 EDC3Q96F86 508 aaKnown RBP10.84□□□□□ -0.67
BDNF-216ENST00000532997 DBNLQ9UJU6 430 aaKnown RBP10.84□□□□□ -0.67
BDNF-216ENST00000532997 E7EWF7 191 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 GNG11P61952 73 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 TUBB4BP68371 445 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 IQCB1Q15051 598 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 PROSER3Q2NL68 480 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 USPL1Q5W0Q7 1092 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 CCDC70Q6NSX1 233 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 KANK3Q6NY19 840 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 ARFGAP3Q9NP61 516 aa10.84□□□□□ -0.67
BDNF-216ENST00000532997 ZNF202O95125 648 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 GCP02774 474 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 ETF1P62495 437 aaKnown RBP10.83□□□□□ -0.68
BDNF-216ENST00000532997 CCDC144BQ3MJ40 725 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 CCDC144CPQ8IYA2 1237 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 OSBPL5Q9H0X9 879 aaPredicted RBP10.83□□□□□ -0.68
BDNF-216ENST00000532997 SNRKQ9NRH2 765 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 PCDHA7Q9UN72 937 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 METAP2P50579 478 aaKnown RBP eCLIP10.83□□□□□ -0.68
BDNF-216ENST00000532997 SLC39A6Q13433 755 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 MPHOSPH8Q99549 860 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 ALG1Q9BT22 464 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 NCOA5Q9HCD5 579 aaKnown RBP10.83□□□□□ -0.68
BDNF-216ENST00000532997 KIF5CO60282 957 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 IARSP41252 1262 aaKnown RBP10.83□□□□□ -0.68
BDNF-216ENST00000532997 BRMS1Q9HCU9 246 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
BDNF-216ENST00000532997 ARHGAP6O43182 974 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 IPO7O95373 1038 aaKnown RBP10.82□□□□□ -0.68
BDNF-216ENST00000532997 HAND2P61296 217 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 MYSM1Q5VVJ2 828 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 FCHSD1Q86WN1 690 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 BPIFA3Q9BQP9 254 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 FAM208AQ9UK61 1670 aaKnown RBP10.82□□□□□ -0.68
BDNF-216ENST00000532997 IKBKBO14920 756 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 POLR3GO15318 223 aaPredicted RBP10.82□□□□□ -0.68
BDNF-216ENST00000532997 GPR108Q9NPR9 543 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 CMA1P23946 247 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 KCNJ6P48051 423 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 PLBD2Q8NHP8 589 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 PPP1R13BQ96KQ4 1090 aa10.82□□□□□ -0.68
BDNF-216ENST00000532997 ATP8B1O43520 1251 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 PPFIA3O75145 1194 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 PDIA3P30101 505 aaKnown RBP10.81□□□□□ -0.68
BDNF-216ENST00000532997 KIF6Q6ZMV9 814 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 SLC52A2Q9HAB3 445 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 CARMIL3Q8ND23 1372 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 PHLPP2Q6ZVD8 1323 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 GOLGA8AA7E2F4 631 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 SSRP1Q08945 709 aaKnown RBP10.81□□□□□ -0.68
BDNF-216ENST00000532997 TTF1Q15361 905 aaPredicted RBP10.81□□□□□ -0.68
BDNF-216ENST00000532997 GOLGA1Q92805 767 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 SEC62Q99442 399 aaKnown RBP10.81□□□□□ -0.68
BDNF-216ENST00000532997 FMN2Q9NZ56 1722 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 UTYO14607 1347 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 CCDC196A0A1B0GTZ2 297 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 EYA2O00167 538 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 MARCKSP29966 332 aaPredicted RBP10.81□□□□□ -0.68
BDNF-216ENST00000532997 ST3GAL1Q11201 340 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 TERF2Q15554 542 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 ERCC6LQ2NKX8 1250 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 ISM2Q6H9L7 571 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 CHST3Q7LGC8 479 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 NACAP1Q9BZK3 213 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 SLIT1O75093 1534 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 DIP2AQ14689 1571 aa10.81□□□□□ -0.68
BDNF-216ENST00000532997 EVCP57679 992 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 ZMYM1Q5SVZ6 1142 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 UTP14AQ9BVJ6 771 aaKnown RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 HSPD1P10809 573 aaKnown RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 NDUFA8P51970 172 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 ZC3H6P61129 1189 aaKnown RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 FBXO38Q6PIJ6 1188 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 LINC00301Q8NCQ3 95 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 EFCAB8A8MWE9 144 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 CUTAO60888 179 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 NFATC2IPQ8NCF5 419 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 CCDC12Q8WUD4 166 aaPredicted RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 DCAF5Q96JK2 942 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 BAG1Q99933 345 aaPredicted RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 CNNM1Q9NRU3 951 aa10.8□□□□□ -0.68
BDNF-216ENST00000532997 XRN1Q8IZH2 1706 aaKnown RBP10.8□□□□□ -0.68
BDNF-216ENST00000532997 PEAK1Q9H792 1746 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 ZBTB43O43298 467 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 NYAP1Q6ZVC0 841 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 RASSF8Q8NHQ8 419 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 CCDC175P0C221 793 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 PFKFB1P16118 471 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 PTPN12Q05209 780 aaKnown RBP10.79□□□□□ -0.68
BDNF-216ENST00000532997 TUBB2AQ13885 445 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 CEP112Q8N8E3 955 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 TUBB2BQ9BVA1 445 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 SLC12A7Q9Y666 1083 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 TUBBP07437 444 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 CCZ1BP86790 482 aa10.79□□□□□ -0.68
BDNF-216ENST00000532997 CCZ1P86791 482 aaPredicted RBP10.79□□□□□ -0.68
BDNF-216ENST00000532997 IFIT5Q13325 482 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms