RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 SLC34A2O95436 690 aa17.45■□□□□ 0.38
COL16A1-217ENST00000532877 UQCRFS1P1P0C7P4 283 aa17.45■□□□□ 0.38
COL16A1-217ENST00000532877 HIBADHP31937 336 aaKnown RBP17.45■□□□□ 0.38
COL16A1-217ENST00000532877 TTC22Q5TAA0 569 aa17.45■□□□□ 0.38
COL16A1-217ENST00000532877 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
COL16A1-217ENST00000532877 TAOK3Q9H2K8 898 aa17.45■□□□□ 0.38
COL16A1-217ENST00000532877 LTBP3Q9NS15 1303 aa17.45■□□□□ 0.38
COL16A1-217ENST00000532877 COL1A1P02452 1464 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 GSPT1P15170 499 aaKnown RBP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 VEGFAP15692 232 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 MCAMP43121 646 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 KIAA2012Q0VF49 1180 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 RASGRF1Q13972 1273 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 SCARF1Q14162 830 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 AOC3Q16853 763 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 BOLA2Q9H3K6 86 aa17.44■□□□□ 0.38
COL16A1-217ENST00000532877 ZNF277Q9NRM2 450 aaPredicted RBP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 GNL3LQ9NVN8 582 aaKnown RBP17.44■□□□□ 0.38
COL16A1-217ENST00000532877 COL4A5P29400 1685 aa17.43■□□□□ 0.38
COL16A1-217ENST00000532877 PPIP5K2O43314 1243 aa17.43■□□□□ 0.38
COL16A1-217ENST00000532877 RASSF7Q02833 373 aa17.43■□□□□ 0.38
COL16A1-217ENST00000532877 IQSEC3Q9UPP2 1182 aaPredicted RBP17.43■□□□□ 0.38
COL16A1-217ENST00000532877 LMNB1P20700 586 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 PI16Q6UXB8 463 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 HAUS7Q99871 368 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 COA1Q9GZY4 146 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 CD209Q9NNX6 404 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 NDUFB9Q9Y6M9 179 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 AK9Q5TCS8 1911 aa17.42■□□□□ 0.38
COL16A1-217ENST00000532877 SEMA3EO15041 775 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 ZBTB22O15209 634 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 IL1R1P14778 569 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 IARSP41252 1262 aaKnown RBP17.41■□□□□ 0.38
COL16A1-217ENST00000532877 DOK7Q18PE1 504 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 BMP2KLQ5H9B9 411 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 SPATA5Q8NB90 893 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 TDRD7Q8NHU6 1098 aaKnown RBP17.41■□□□□ 0.38
COL16A1-217ENST00000532877 DNAJC2Q99543 621 aaKnown RBP17.41■□□□□ 0.38
COL16A1-217ENST00000532877 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 SNRKQ9NRH2 765 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
COL16A1-217ENST00000532877 SCN9AQ15858 1988 aa17.4■□□□□ 0.38
COL16A1-217ENST00000532877 MAP4K4O95819 1239 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-217ENST00000532877 ZAP70P43403 619 aa17.4■□□□□ 0.38
COL16A1-217ENST00000532877 LARGE2Q8N3Y3 721 aa17.4■□□□□ 0.38
COL16A1-217ENST00000532877 DBNDD1Q9H9R9 158 aa17.4■□□□□ 0.38
COL16A1-217ENST00000532877 DENND2AQ9ULE3 1009 aa17.4■□□□□ 0.38
COL16A1-217ENST00000532877 PDS5AQ29RF7 1337 aaKnown RBP17.4■□□□□ 0.38
COL16A1-217ENST00000532877 ZNF646O15015 1829 aaPredicted RBP17.4■□□□□ 0.38
COL16A1-217ENST00000532877 G3V3G9 751 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 ECE2O60344 883 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 FRAT2O75474 233 aaPredicted RBP17.39■□□□□ 0.37
COL16A1-217ENST00000532877 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 EDC3Q96F86 508 aaKnown RBP17.39■□□□□ 0.37
COL16A1-217ENST00000532877 PAG1Q9NWQ8 432 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 PSME4Q14997 1843 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 DOCK2Q92608 1830 aa17.39■□□□□ 0.37
COL16A1-217ENST00000532877 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
COL16A1-217ENST00000532877 GOLIM4O00461 696 aa17.38■□□□□ 0.37
COL16A1-217ENST00000532877 SDSP20132 328 aa17.38■□□□□ 0.37
COL16A1-217ENST00000532877 PODNQ7Z5L7 613 aa17.38■□□□□ 0.37
COL16A1-217ENST00000532877 MYO5AQ9Y4I1 1855 aaKnown RBP17.37■□□□□ 0.37
COL16A1-217ENST00000532877 CYP2E1P05181 493 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-217ENST00000532877 CHAF1AQ13111 956 aaPredicted RBP17.37■□□□□ 0.37
COL16A1-217ENST00000532877 CNTROBQ8N137 903 aa17.37■□□□□ 0.37
COL16A1-217ENST00000532877 EVI5LQ96CN4 794 aa17.37■□□□□ 0.37
COL16A1-217ENST00000532877 ANTXR1Q9H6X2 564 aa17.37■□□□□ 0.37
COL16A1-217ENST00000532877 JAG2Q9Y219 1238 aa17.37■□□□□ 0.37
COL16A1-217ENST00000532877 YDJCA8MPS7 323 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 NIM1KQ8IY84 436 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 RILPL2Q969X0 211 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 CREBZFQ9NS37 354 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 MYH7P12883 1935 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 FAM205AQ6ZU69 1335 aa17.36■□□□□ 0.37
COL16A1-217ENST00000532877 PIH1D3Q9NQM4 214 aaKnown RBP17.35■□□□□ 0.37
COL16A1-217ENST00000532877 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
COL16A1-217ENST00000532877 MAST2Q6P0Q8 1798 aa17.35■□□□□ 0.37
COL16A1-217ENST00000532877 FOXN1O15353 648 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 SCN4AP35499 1836 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 GTF2IP78347 998 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 TTF1Q15361 905 aaPredicted RBP17.34■□□□□ 0.37
COL16A1-217ENST00000532877 TBC1D9Q6ZT07 1266 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 KBTBD3Q8NAB2 608 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 WDR66Q8TBY9 1149 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 JDP2Q8WYK2 163 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 FBXW7Q969H0 707 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 FSD1Q9BTV5 496 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 KCNQ5Q9NR82 932 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 SALL1Q9NSC2 1324 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 ZNRF3Q9ULT6 936 aa17.34■□□□□ 0.37
COL16A1-217ENST00000532877 RFX7Q2KHR2 1363 aa17.33■□□□□ 0.36
COL16A1-217ENST00000532877 ADAMTSL1Q8N6G6 1762 aa17.33■□□□□ 0.36
COL16A1-217ENST00000532877 CNTNAP1P78357 1384 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 USP17L3A6NCW0 530 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 USP17L4A6NCW7 530 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 MFSD14BQ5SR56 506 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 STRIP1Q5VSL9 837 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 TTLL5Q6EMB2 1281 aa17.32■□□□□ 0.36
COL16A1-217ENST00000532877 USP17L1Q7RTZ2 530 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms