RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 SURF6O75683 361 aaKnown RBP24.6■■□□□ 1.53
CPSF1-209ENST00000532725 FKBP1AP62942 108 aaKnown RBP24.6■■□□□ 1.53
CPSF1-209ENST00000532725 TBC1D10BQ4KMP7 808 aaPredicted RBP24.6■■□□□ 1.53
CPSF1-209ENST00000532725 RBM26Q5T8P6 1007 aaKnown RBP24.6■■□□□ 1.53
CPSF1-209ENST00000532725 MAP1SQ66K74 1059 aaPredicted RBP24.6■■□□□ 1.53
CPSF1-209ENST00000532725 SIRT2Q8IXJ6 389 aa24.6■■□□□ 1.53
CPSF1-209ENST00000532725 IQSEC3Q9UPP2 1182 aaPredicted RBP24.59■■□□□ 1.53
CPSF1-209ENST00000532725 JAG2Q9Y219 1238 aa24.59■■□□□ 1.53
CPSF1-209ENST00000532725 AKAP2Q9Y2D5 859 aa24.59■■□□□ 1.53
CPSF1-209ENST00000532725 MMP14P50281 582 aa24.58■■□□□ 1.53
CPSF1-209ENST00000532725 ZNF646O15015 1829 aaPredicted RBP24.58■■□□□ 1.53
CPSF1-209ENST00000532725 A0A1B0GUL7 405 aa24.57■■□□□ 1.52
CPSF1-209ENST00000532725 KIF4BQ2VIQ3 1234 aa24.57■■□□□ 1.52
CPSF1-209ENST00000532725 KIAA0825Q8IV33 1275 aa24.57■■□□□ 1.52
CPSF1-209ENST00000532725 MYOZ2Q9NPC6 264 aa24.57■■□□□ 1.52
CPSF1-209ENST00000532725 PASKQ96RG2 1323 aa24.57■■□□□ 1.52
CPSF1-209ENST00000532725 ADORA1P30542 326 aa24.56■■□□□ 1.52
CPSF1-209ENST00000532725 OGFOD1Q8N543 542 aa24.56■■□□□ 1.52
CPSF1-209ENST00000532725 XAGE2Q96GT9 111 aa24.55■■□□□ 1.52
CPSF1-209ENST00000532725 ZBTB22O15209 634 aa24.54■■□□□ 1.52
CPSF1-209ENST00000532725 FRAT2O75474 233 aaPredicted RBP24.54■■□□□ 1.52
CPSF1-209ENST00000532725 PHKA1P46020 1223 aa24.54■■□□□ 1.52
CPSF1-209ENST00000532725 APLP1P51693 650 aa24.54■■□□□ 1.52
CPSF1-209ENST00000532725 OS9Q13438 667 aaPredicted RBP24.54■■□□□ 1.52
CPSF1-209ENST00000532725 MFSD14BQ5SR56 506 aa24.54■■□□□ 1.52
CPSF1-209ENST00000532725 GPR108Q9NPR9 543 aa24.54■■□□□ 1.52
CPSF1-209ENST00000532725 SCARF1Q14162 830 aa24.53■■□□□ 1.52
CPSF1-209ENST00000532725 CCDC102BQ68D86 513 aa24.53■■□□□ 1.52
CPSF1-209ENST00000532725 NEUROD6Q96NK8 337 aa24.53■■□□□ 1.52
CPSF1-209ENST00000532725 GNL3LQ9NVN8 582 aaKnown RBP24.53■■□□□ 1.52
CPSF1-209ENST00000532725 HDAC9Q9UKV0 1011 aa24.53■■□□□ 1.52
CPSF1-209ENST00000532725 HMMRO75330 724 aa24.52■■□□□ 1.52
CPSF1-209ENST00000532725 CHAF1AQ13111 956 aaPredicted RBP24.52■■□□□ 1.52
CPSF1-209ENST00000532725 EXOC6BQ9Y2D4 811 aa24.52■■□□□ 1.52
CPSF1-209ENST00000532725 F8W031 263 aaPredicted RBP24.51■■□□□ 1.51
CPSF1-209ENST00000532725 TBC1D22AQ8WUA7 517 aa24.51■■□□□ 1.51
CPSF1-209ENST00000532725 ZBED3Q96IU2 234 aaPredicted RBP24.51■■□□□ 1.51
CPSF1-209ENST00000532725 ASTN2O75129 1339 aaPredicted RBP24.51■■□□□ 1.51
CPSF1-209ENST00000532725 WNT10BO00744 389 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 GRIK5Q16478 980 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 NBPF9Q3BBW0 867 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 TNNI3KQ59H18 835 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 CDC37L1Q7L3B6 337 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 FPGT-TNNI3KV9GXZ4 949 aa24.5■■□□□ 1.51
CPSF1-209ENST00000532725 TRAF5O00463 557 aa24.49■■□□□ 1.51
CPSF1-209ENST00000532725 SEMA3EO15041 775 aa24.49■■□□□ 1.51
CPSF1-209ENST00000532725 FMR1Q06787 632 aaKnown RBP eCLIP24.49■■□□□ 1.515e-7■■■■□ 21.1
CPSF1-209ENST00000532725 HSP90AB4PQ58FF6 505 aa24.49■■□□□ 1.51
CPSF1-209ENST00000532725 MTMR14Q8NCE2 650 aa24.49■■□□□ 1.51
CPSF1-209ENST00000532725 GLIS2Q9BZE0 524 aaPredicted RBP24.49■■□□□ 1.51
CPSF1-209ENST00000532725 USP48Q86UV5 1035 aa24.48■■□□□ 1.51
CPSF1-209ENST00000532725 ERC1Q8IUD2 1116 aa24.48■■□□□ 1.51
CPSF1-209ENST00000532725 WDR66Q8TBY9 1149 aa24.48■■□□□ 1.51
CPSF1-209ENST00000532725 DCPSQ96C86 337 aaKnown RBP24.48■■□□□ 1.51
CPSF1-209ENST00000532725 CRBNQ96SW2 442 aa24.48■■□□□ 1.51
CPSF1-209ENST00000532725 DENND2AQ9ULE3 1009 aa24.48■■□□□ 1.51
CPSF1-209ENST00000532725 TTF2Q9UNY4 1162 aaKnown RBP24.48■■□□□ 1.51
CPSF1-209ENST00000532725 HTRA3P83110 453 aa24.47■■□□□ 1.51
CPSF1-209ENST00000532725 ANGEL2Q5VTE6 544 aaKnown RBP24.47■■□□□ 1.51
CPSF1-209ENST00000532725 EAF2Q96CJ1 260 aaPredicted RBP24.47■■□□□ 1.51
CPSF1-209ENST00000532725 SUGT1Q9Y2Z0 365 aa24.47■■□□□ 1.51
CPSF1-209ENST00000532725 PCDHAC2Q9Y5I4 1007 aa24.47■■□□□ 1.51
CPSF1-209ENST00000532725 POLR2AP24928 1970 aaKnown RBP24.46■■□□□ 1.51
CPSF1-209ENST00000532725 DLGAP5Q15398 846 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 CFAP100Q494V2 611 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 GORABQ5T7V8 394 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 DLK2Q6UY11 383 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 KRT26Q7Z3Y9 468 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 RHPN1Q8TCX5 695 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 MRIQ9BWK5 157 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 GGA3Q9NZ52 723 aa24.46■■□□□ 1.51
CPSF1-209ENST00000532725 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
CPSF1-209ENST00000532725 COL1A1P02452 1464 aaPredicted RBP24.45■■□□□ 1.51
CPSF1-209ENST00000532725 RASGRF1Q13972 1273 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 CST9Q5W186 159 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 PRMT6Q96LA8 375 aaPredicted RBP24.45■■□□□ 1.5
CPSF1-209ENST00000532725 DBNDD2Q9BQY9 259 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 SERPINA10Q9UK55 444 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 PCDHB15Q9Y5E8 787 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 CEP350Q5VT06 3117 aa24.45■■□□□ 1.5
CPSF1-209ENST00000532725 PITPNM2Q9BZ72 1349 aa24.44■■□□□ 1.5
CPSF1-209ENST00000532725 TMEM88BA6NKF7 163 aa24.44■■□□□ 1.5
CPSF1-209ENST00000532725 RAB11FIP3O75154 756 aa24.44■■□□□ 1.5
CPSF1-209ENST00000532725 DNAJC5GQ8N7S2 189 aa24.44■■□□□ 1.5
CPSF1-209ENST00000532725 CREBZFQ9NS37 354 aa24.44■■□□□ 1.5
CPSF1-209ENST00000532725 PDS5AQ29RF7 1337 aaKnown RBP24.43■■□□□ 1.5
CPSF1-209ENST00000532725 SALL1Q9NSC2 1324 aa24.43■■□□□ 1.5
CPSF1-209ENST00000532725 SPDYE2BA6NHP3 402 aa24.43■■□□□ 1.5
CPSF1-209ENST00000532725 SPDYE6P0CI01 402 aa24.43■■□□□ 1.5
CPSF1-209ENST00000532725 ARID4AP29374 1257 aaPredicted RBP24.43■■□□□ 1.5
CPSF1-209ENST00000532725 HDLBPQ00341 1268 aaKnown RBP24.43■■□□□ 1.5
CPSF1-209ENST00000532725 CCDC8Q9H0W5 538 aaPredicted RBP24.43■■□□□ 1.5
CPSF1-209ENST00000532725 ARAP2Q8WZ64 1704 aa24.43■■□□□ 1.5
CPSF1-209ENST00000532725 ADM5C9JUS6 153 aa24.42■■□□□ 1.5
CPSF1-209ENST00000532725 CRKP46108 304 aa24.42■■□□□ 1.5
CPSF1-209ENST00000532725 SULF1Q8IWU6 871 aa24.42■■□□□ 1.5
CPSF1-209ENST00000532725 KIF1BPQ96EK5 621 aa24.42■■□□□ 1.5
CPSF1-209ENST00000532725 HMG20BQ9P0W2 317 aa24.42■■□□□ 1.5
CPSF1-209ENST00000532725 DBNLQ9UJU6 430 aaKnown RBP24.42■■□□□ 1.5
CPSF1-209ENST00000532725 UQCRFS1P1P0C7P4 283 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms