RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SCARF1Q14162 830 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 ARID5BQ14865 1188 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 NBPF1Q3BBV0 1214 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 ZC3H12BQ5HYM0 836 aaKnown RBP5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 XP32Q5T750 250 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 GPAT2Q6NUI2 795 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 EHBP1Q8NDI1 1231 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 RHPN1Q8TCX5 695 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 SGSM3Q96HU1 749 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 NLRP3Q96P20 1036 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 CRBNQ96SW2 442 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 ZSCAN10Q96SZ4 725 aaPredicted RBP5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 SPOCK3Q9BQ16 436 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 PRR12Q9ULL5 1215 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 ATP8A1Q9Y2Q0 1164 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 EID1Q9Y6B2 187 aa5.78□□□□□ -1.48
AC055878.1-201ENST00000531858 CCDC163A0A0D9SF12 145 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 CCDC85CA6NKD9 419 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 CREB3O43889 395 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 HCLS1P14317 486 aaPredicted RBP5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 EPHB1P54762 984 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 LONRF2Q1L5Z9 754 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 SNAP47Q5SQN1 464 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 FAM196AQ6ZSG2 479 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 GLIS3Q8NEA6 775 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 ST13P5Q8NFI4 369 aaPredicted RBP5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 C7orf43Q8WVR3 580 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 SUSD3Q96L08 255 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 RPS6KC1Q96S38 1066 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 KANSL2Q9H9L4 492 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 MAPK8IP1Q9UQF2 711 aa5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 RTCBQ9Y3I0 505 aaKnown RBP5.77□□□□□ -1.49
AC055878.1-201ENST00000531858 SIAH2O43255 324 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 KCNQ2O43526 872 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 PLIN1O60240 522 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CAND2O75155 1236 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 EGFRP00533 1210 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 GPC1P35052 558 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 LIG3P49916 1009 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CASP7P55210 303 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 HDAC1Q13547 482 aaPredicted RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CAMK2GQ13555 558 aaPredicted RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 UBE4AQ14139 1066 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 RALBP1Q15311 655 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 MTERF2Q49AM1 385 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 DALRD3Q5D0E6 543 aaKnown RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 GNASQ5JWF2 1037 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 TMEM214Q6NUQ4 689 aaKnown RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 TSHZ1Q6ZSZ6 1077 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 REXO1Q8N1G1 1221 aaKnown RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CELF2-AS1Q8N7Q2 184 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 RBBP8NLQ8NC74 664 aaPredicted RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 ZSWIM2Q8NEG5 633 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CHAC2Q8WUX2 184 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 EHD4Q9H223 541 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 CHRDQ9H2X0 955 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 ABI2Q9NYB9 513 aaPredicted RBP5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 KCNMB2Q9Y691 235 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 COMMD10Q9Y6G5 202 aa5.76□□□□□ -1.49
AC055878.1-201ENST00000531858 PF4P02776 101 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 TATP17735 454 aaPredicted RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 PTGIRP43119 386 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 ZNF165P49910 485 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 OS9Q13438 667 aaPredicted RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 TRIP4Q15650 581 aaPredicted RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 LONRF3Q496Y0 759 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 MRPL14Q6P1L8 145 aaKnown RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 AGMOQ6ZNB7 445 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 C19orf47Q8N9M1 422 aaKnown RBP5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 GOLM1Q8NBJ4 401 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 APBA2Q99767 749 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 TMEM63CQ9P1W3 806 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 MCM8Q9UJA3 840 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 ADAMTS8Q9UP79 889 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 LEMD3Q9Y2U8 911 aa5.75□□□□□ -1.49
AC055878.1-201ENST00000531858 TMEM238LA0A1B0GVL6 79 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 EREGO14944 169 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 CES1P23141 567 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 SOX5P35711 763 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 TXLNAP40222 546 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 STAT3P40763 770 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 C4orf46Q504U0 113 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 TM4SF20Q53R12 229 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 NLRP13Q86W25 1043 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 TRIM42Q8IWZ5 723 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 PGBD3Q8N328 593 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 SAMD3Q8N6K7 520 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 MFSD3Q96ES6 412 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 OXCT2Q9BYC2 517 aaPredicted RBP5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 RBSNQ9H1K0 784 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 CAAP1Q9H8G2 361 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 THRAP3Q9Y2W1 955 aaKnown RBP5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 PARP3Q9Y6F1 533 aa5.74□□□□□ -1.49
AC055878.1-201ENST00000531858 A0A1W2PP55 124 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 SOBPA7XYQ1 873 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 RFPL3O75679 317 aa5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 POLR3DP05423 398 aaPredicted RBP5.73□□□□□ -1.49
AC055878.1-201ENST00000531858 FCGRTP55899 365 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms