RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 FBXL18Q96ME1 805 aa3.73□□□□□ -1.81
RC3H1-206ENST00000531594 MKNK1Q9BUB5 465 aa3.73□□□□□ -1.81
RC3H1-206ENST00000531594 TMPRSS13Q9BYE2 586 aa3.73□□□□□ -1.81
RC3H1-206ENST00000531594 ZC3H7BQ9UGR2 993 aaKnown RBP3.73□□□□□ -1.81
RC3H1-206ENST00000531594 LOC100289279A0A1B0GTE1 492 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 FAM95CA0A1B0GW59 222 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 ZNF865P0CJ78 1059 aaPredicted RBP3.72□□□□□ -1.81
RC3H1-206ENST00000531594 ZAP70P43403 619 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 NAA30Q147X3 362 aaPredicted RBP3.72□□□□□ -1.81
RC3H1-206ENST00000531594 OCLNQ16625 522 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 TMEM132AQ24JP5 1023 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 SPRED2Q7Z698 418 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 FNBP4Q8N3X1 1017 aaPredicted RBP3.72□□□□□ -1.81
RC3H1-206ENST00000531594 TBC1D32Q96NH3 1257 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 USP26Q9BXU7 913 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 VRTNQ9H8Y1 702 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 LRRC4CQ9HCJ2 640 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 BSDC1Q9NW68 430 aaPredicted RBP3.72□□□□□ -1.81
RC3H1-206ENST00000531594 ABI2Q9NYB9 513 aaPredicted RBP3.72□□□□□ -1.81
RC3H1-206ENST00000531594 PRKAG2Q9UGJ0 569 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 SOX13Q9UN79 622 aa3.72□□□□□ -1.81
RC3H1-206ENST00000531594 MEGF11A6BM72 1044 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 A6NHS1 94 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 DBX1A6NMT0 343 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 SOX1O00570 391 aaPredicted RBP3.71□□□□□ -1.82
RC3H1-206ENST00000531594 BRD2P25440 801 aaKnown RBP3.71□□□□□ -1.82
RC3H1-206ENST00000531594 ZNF792Q3KQV3 632 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 LCE5AQ5TCM9 118 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 NUTM2GQ5VZR2 741 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 C16orf46Q6P387 395 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 ZNF765Q7L2R6 523 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 ZAR1Q86SH2 424 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 C2CD4AQ8NCU7 369 aaPredicted RBP3.71□□□□□ -1.82
RC3H1-206ENST00000531594 OSGEPQ9NPF4 335 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 DZANK1Q9NVP4 752 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 SALL4Q9UJQ4 1053 aa3.71□□□□□ -1.82
RC3H1-206ENST00000531594 CTSBP07858 339 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 CD96P40200 585 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 C19orf57Q0VDD7 668 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 BNIP3Q12983 259 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 PAOXQ6QHF9 649 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 VN1R5Q7Z5H4 357 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 ATCAYQ86WG3 371 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 CILP2Q8IUL8 1156 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 C1orf127Q8N9H9 656 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 SMG8Q8ND04 991 aaKnown RBP3.7□□□□□ -1.82
RC3H1-206ENST00000531594 PIK3R5Q8WYR1 880 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 ELP3Q9H9T3 547 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 ADAMTS6Q9UKP5 1117 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 U3KQE9 123 aa3.7□□□□□ -1.82
RC3H1-206ENST00000531594 PDE2AO00408 941 aaPredicted RBP3.69□□□□□ -1.82
RC3H1-206ENST00000531594 DYNC1LI2O43237 492 aaPredicted RBP3.69□□□□□ -1.82
RC3H1-206ENST00000531594 CABP4P57796 275 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 PLCL1Q15111 1095 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 TPRNQ4KMQ1 711 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 CFAP70Q5T0N1 1121 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 GIMAP7Q8NHV1 300 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 FAM200AQ8TCP9 573 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 BCL7CQ8WUZ0 217 aaPredicted RBP3.69□□□□□ -1.82
RC3H1-206ENST00000531594 WNT8BQ93098 351 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 METTL22Q9BUU2 404 aaPredicted RBP3.69□□□□□ -1.82
RC3H1-206ENST00000531594 CHRDQ9H2X0 955 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 SUGCTQ9HAC7 445 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 ZMIZ1Q9ULJ6 1067 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 ACTL7BQ9Y614 415 aa3.69□□□□□ -1.82
RC3H1-206ENST00000531594 NFICP08651 508 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 RAB6AP20340 208 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 USP11P51784 963 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 FAM69CQ0P6D2 419 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 CPSF6Q16630 551 aaKnown RBP eCLIP3.68□□□□□ -1.82
RC3H1-206ENST00000531594 AGBL5Q8NDL9 886 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 STK32AQ8WU08 396 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 EZH1Q92800 747 aaPredicted RBP3.68□□□□□ -1.82
RC3H1-206ENST00000531594 NUDT16Q96DE0 195 aaKnown RBP3.68□□□□□ -1.82
RC3H1-206ENST00000531594 KRTAP9-3Q9BYQ3 159 aa3.68□□□□□ -1.82
RC3H1-206ENST00000531594 NOVA2Q9UNW9 492 aaKnown RBP3.68□□□□□ -1.82
RC3H1-206ENST00000531594 METTL12A8MUP2 240 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 ECEL1O95672 775 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 RNASE1P07998 156 aaKnown RBP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 ADH5P11766 374 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 SOX4Q06945 474 aaPredicted RBP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 IKBKEQ14164 716 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 ZNF438Q7Z4V0 828 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 PROSER2Q86WR7 435 aaPredicted RBP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 GLIS3Q8NEA6 775 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 FAM168AQ92567 244 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 CALR3Q96L12 384 aaKnown RBP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 ZKSCAN3Q9BRR0 538 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 NRSN2Q9GZP1 204 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 SEMA6CQ9H3T2 930 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 LGR6Q9HBX8 967 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 CYP4F12Q9HCS2 524 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 UTP3Q9NQZ2 479 aaKnown RBP eCLIP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 MBNL3Q9NUK0 354 aaKnown RBP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 FAM105AQ9NUU6 356 aa3.67□□□□□ -1.82
RC3H1-206ENST00000531594 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.67□□□□□ -1.82
RC3H1-206ENST00000531594 FAM177BA6PVY3 158 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 FARP2O94887 1054 aaPredicted RBP3.66□□□□□ -1.82
RC3H1-206ENST00000531594 CD8BP10966 210 aa3.66□□□□□ -1.82
RC3H1-206ENST00000531594 ESRRAP11474 423 aaPredicted RBP3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms