RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 A0A1B0GUL7 405 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 TRIM6-TRIM34B2RNG4 842 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 HOXA10P31260 410 aaPredicted RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 PDE6BP35913 854 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 RPS8P62241 208 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 MAP3K9P80192 1104 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 R3HDM1Q15032 1099 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 ATP2B3Q16720 1220 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 LRRFIP1Q32MZ4 808 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 SPNS2Q8IVW8 549 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 VGLL2Q8N8G2 317 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 RPGRQ92834 1020 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 RBM17Q96I25 401 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 CRAMP1Q96RY5 1269 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 PUS3Q9BZE2 481 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 CCDC8Q9H0W5 538 aaPredicted RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 EMILIN3Q9NT22 766 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 DBNLQ9UJU6 430 aaKnown RBP11.99□□□□□ -0.49
CTNND1-228ENST00000531007 RFX7Q2KHR2 1363 aa11.99□□□□□ -0.49
CTNND1-228ENST00000531007 BBOX1O75936 387 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 IFIT1P09914 478 aaKnown RBP11.98□□□□□ -0.49
CTNND1-228ENST00000531007 UQCRFS1P1P0C7P4 283 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 SLC5A1P13866 664 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 DDR1Q08345 913 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 CAMK2BQ13554 666 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 GRAPQ13588 217 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 GORABQ5T7V8 394 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 GRAPLQ8TC17 118 aaPredicted RBP11.98□□□□□ -0.49
CTNND1-228ENST00000531007 NEUROD6Q96NK8 337 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 SEC31BQ9NQW1 1179 aa11.98□□□□□ -0.49
CTNND1-228ENST00000531007 IGSF3O75054 1194 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 REC8O95072 547 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 MMP10P09238 476 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 FGFR2P21802 821 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 UBE4AQ14139 1066 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 TBC1D9Q6ZT07 1266 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 IL27Q8NEV9 243 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 RUFY2Q8WXA3 655 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 HAUS7Q99871 368 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 DBNDD2Q9BQY9 259 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 ANO8Q9HCE9 1232 aaPredicted RBP11.97□□□□□ -0.49
CTNND1-228ENST00000531007 RBM19Q9Y4C8 960 aaKnown RBP11.97□□□□□ -0.49
CTNND1-228ENST00000531007 SPEF2Q9C093 1822 aa11.97□□□□□ -0.49
CTNND1-228ENST00000531007 EVI5O60447 810 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 ALDH1B1P30837 517 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 TIMM10P62072 90 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 CHRNDQ07001 517 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 RILPL2Q969X0 211 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 XAGE2Q96GT9 111 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 BCL11AQ9H165 835 aa11.96□□□□□ -0.49
CTNND1-228ENST00000531007 CASZ1Q86V15 1759 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 ARAP2Q8WZ64 1704 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 NPR1P16066 1061 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 TTF1Q15361 905 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-228ENST00000531007 TTC39AQ5SRH9 613 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 TLR7Q9NYK1 1049 aaKnown RBP11.95□□□□□ -0.5
CTNND1-228ENST00000531007 MINPP1Q9UNW1 487 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 LEMD3Q9Y2U8 911 aa11.95□□□□□ -0.5
CTNND1-228ENST00000531007 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-228ENST00000531007 RAD50Q92878 1312 aa11.94□□□□□ -0.5
CTNND1-228ENST00000531007 CHMLP26374 656 aa11.94□□□□□ -0.5
CTNND1-228ENST00000531007 TMED8Q6PL24 325 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-228ENST00000531007 CELF1Q92879 486 aaKnown RBP11.94□□□□□ -0.5
CTNND1-228ENST00000531007 TMX4Q9H1E5 349 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-228ENST00000531007 GNL3LQ9NVN8 582 aaKnown RBP11.94□□□□□ -0.5
CTNND1-228ENST00000531007 TNRC6CQ9HCJ0 1690 aaKnown RBP11.94□□□□□ -0.5
CTNND1-228ENST00000531007 SEMA3EO15041 775 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 ARID4AP29374 1257 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-228ENST00000531007 ANP32AP39687 249 aaKnown RBP11.93□□□□□ -0.5
CTNND1-228ENST00000531007 GRIPAP1Q4V328 841 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 CAVIN4Q5BKX8 364 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 TSHZ3Q63HK5 1081 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 STYK1Q6J9G0 422 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 MASTLQ96GX5 879 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 BOLA2Q9H3K6 86 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 DIAPH3Q9NSV4 1193 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 WDR70Q9NW82 654 aa11.93□□□□□ -0.5
CTNND1-228ENST00000531007 XDHP47989 1333 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 PDS5AQ29RF7 1337 aaKnown RBP11.92□□□□□ -0.5
CTNND1-228ENST00000531007 AK9Q5TCS8 1911 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 H0YIN7 160 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 ZFYP08048 801 aaPredicted RBP11.92□□□□□ -0.5
CTNND1-228ENST00000531007 SRGNP10124 158 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 KCNJ4P48050 445 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 ZSCAN25Q6NSZ9 544 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 C15orf52Q6ZUT6 534 aaKnown RBP11.92□□□□□ -0.5
CTNND1-228ENST00000531007 SP8Q8IXZ3 490 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 KBTBD3Q8NAB2 608 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 TBC1D32Q96NH3 1257 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 ESYT1Q9BSJ8 1104 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 PAG1Q9NWQ8 432 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
CTNND1-228ENST00000531007 ATP2B4P23634 1241 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 RBM25P49756 843 aaKnown RBP11.91□□□□□ -0.5
CTNND1-228ENST00000531007 LSM11P83369 360 aaKnown RBP eCLIP11.91□□□□□ -0.5
CTNND1-228ENST00000531007 MMRN1Q13201 1228 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 CCDC102BQ68D86 513 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 ZNF454Q8N9F8 522 aa11.91□□□□□ -0.5
CTNND1-228ENST00000531007 FSD1Q9BTV5 496 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms