RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 TMC6Q7Z403 805 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ENGASEQ8NFI3 743 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 ZKSCAN4Q969J2 545 aaPredicted RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 PAGR1Q9BTK6 254 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 XPO4Q9C0E2 1151 aaKnown RBP9.36□□□□□ -0.91
CSDE1-214ENST00000530886 TERF2IPQ9NYB0 399 aa9.36□□□□□ -0.91
CSDE1-214ENST00000530886 TMEM139Q8IV31 216 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 STAG3Q9UJ98 1225 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 AGLP35573 1532 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 KIF3BO15066 747 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 CUTAO60888 179 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 PLCB4Q15147 1175 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 ATL3Q6DD88 541 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 AOPEPQ8N6M6 819 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 CFAP45Q9UL16 551 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 PPP2R2CQ9Y2T4 447 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 EBAG9O00559 213 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 CPA1P15085 419 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 CHMP4BP1P59074 171 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 MCM6Q14566 821 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 FBXW10Q5XX13 1052 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 WDR93Q6P2C0 686 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 G2E3Q7L622 706 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 YTHDF3Q7Z739 585 aaKnown RBP9.35□□□□□ -0.91
CSDE1-214ENST00000530886 ANKRD18AQ8IVF6 992 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 ERCC4Q92889 916 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-214ENST00000530886 TEX13AQ9BXU3 409 aaPredicted RBP9.35□□□□□ -0.91
CSDE1-214ENST00000530886 HSD3B7Q9H2F3 369 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 CHMP3Q9Y3E7 222 aa9.35□□□□□ -0.91
CSDE1-214ENST00000530886 MLH3Q9UHC1 1453 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 CDHR2Q9BYE9 1310 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 DTNBO60941 627 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 SYF2O95926 243 aaKnown RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 HMOX1P09601 288 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 INPP5BP32019 993 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 LIG3P49916 1009 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 ATP8B2P98198 1209 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 RESTQ13127 1097 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 GNL2Q13823 731 aaKnown RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 NECTIN1Q15223 517 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 SYTL4Q96C24 671 aaPredicted RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 JPH2Q9BR39 696 aaPredicted RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 TPCN1Q9ULQ1 816 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 EDC4Q6P2E9 1401 aaKnown RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 IKBKBO14920 756 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 NF2P35240 595 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 TBC1D8BQ0IIM8 1120 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 POLA2Q14181 598 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 DCTN1Q14203 1278 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 WDR24Q96S15 920 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 LARP6Q9BRS8 491 aaKnown RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 TRIM6Q9C030 488 aaPredicted RBP9.34□□□□□ -0.91
CSDE1-214ENST00000530886 ABCB6Q9NP58 842 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 RCOR1Q9UKL0 485 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 CYP46A1Q9Y6A2 500 aa9.34□□□□□ -0.91
CSDE1-214ENST00000530886 A6NNZ2 444 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 ANKRD65E5RJM6 399 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 KIF4BQ2VIQ3 1234 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 TUBB8Q3ZCM7 444 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 RILPL2Q969X0 211 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 BORCS6Q96GS4 357 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 CLIC6Q96NY7 704 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 ETAA1Q9NY74 926 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 IFNKQ9P0W0 207 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-214ENST00000530886 MRC1P22897 1456 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 USP54Q70EL1 1684 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 RNF40O75150 1001 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 FAM173BQ6P4H8 233 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 CCAR1Q8IX12 1150 aaKnown RBP9.33□□□□□ -0.92
CSDE1-214ENST00000530886 PNKPQ96T60 521 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 FAM160A1Q05DH4 1040 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 N4BP2L2Q92802 583 aaPredicted RBP9.33□□□□□ -0.92
CSDE1-214ENST00000530886 DHX58Q96C10 678 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 SH3GL3Q99963 347 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 EMILIN1Q9Y6C2 1016 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 MAP3K5Q99683 1374 aa9.33□□□□□ -0.92
CSDE1-214ENST00000530886 ZC3H4Q9UPT8 1303 aaKnown RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 ANKRD1Q15327 319 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 NAIF1Q69YI7 327 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 OTUD6BQ8N6M0 293 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 NWD1Q149M9 1564 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 CBFA2T2O43439 604 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 NEBLO76041 1014 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 CLSTN1O94985 981 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 RDXP35241 583 aaKnown RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 AMPHP49418 695 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 SLC8A3P57103 927 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 PTH1RQ03431 593 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 NCAPHQ15003 741 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 ZNF483Q8TF39 744 aaPredicted RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 CDC23Q9UJX2 597 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 APBB1O00213 710 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 STX10O60499 249 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 PAX7P23759 505 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 CCT4P50991 539 aaKnown RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 GNG11P61952 73 aa9.32□□□□□ -0.92
CSDE1-214ENST00000530886 ZC3H12AQ5D1E8 599 aaKnown RBP9.32□□□□□ -0.92
CSDE1-214ENST00000530886 TLDC1Q6P9B6 456 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms