RNA–Protein interactions for RNA: ENST00000530724.1

TRIM3-210, Transcript of tripartite motif containing 3, humanhuman

TSL 2

Gene TRIM3, Length 651 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-210ENST00000530724 MAP3K2Q9Y2U5 619 aa13.55□□□□□ -0.24
TRIM3-210ENST00000530724 VWA3AA6NCI4 1184 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 DHX16O60231 1041 aaKnown RBP13.54□□□□□ -0.24
TRIM3-210ENST00000530724 FECHP22830 423 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 RFX5P48382 616 aaPredicted RBP13.54□□□□□ -0.24
TRIM3-210ENST00000530724 ZRSR1Q15695 479 aaKnown RBP13.54□□□□□ -0.24
TRIM3-210ENST00000530724 ZSCAN26Q16670 478 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 KBTBD3Q8NAB2 608 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 LRRN4CLQ8ND94 238 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 KIFC2Q96AC6 838 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 SDF4Q9BRK5 362 aa13.54□□□□□ -0.24
TRIM3-210ENST00000530724 SPTLC2O15270 562 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 FANCGO15287 622 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 SASH3O75995 380 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 PDIA3P30101 505 aaKnown RBP13.53□□□□□ -0.24
TRIM3-210ENST00000530724 ACTN2P35609 894 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 TXLNAP40222 546 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 NDUFA8P51970 172 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 SF3B2Q13435 895 aaKnown RBP13.53□□□□□ -0.24
TRIM3-210ENST00000530724 SLC39A14Q15043 492 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 NFATC2IPQ8NCF5 419 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
TRIM3-210ENST00000530724 BRMS1Q9HCU9 246 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 MKRN1Q9UHC7 482 aaKnown RBP13.53□□□□□ -0.24
TRIM3-210ENST00000530724 PA2G4Q9UQ80 394 aaKnown RBP13.53□□□□□ -0.24
TRIM3-210ENST00000530724 PPP2R2CQ9Y2T4 447 aa13.53□□□□□ -0.24
TRIM3-210ENST00000530724 SMC2O95347 1197 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 OAS2P29728 719 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 CASQ1P31415 396 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 NOP2P46087 812 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 ZMYM1Q5SVZ6 1142 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 GORABQ5T7V8 394 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 MYSM1Q5VVJ2 828 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 STOX1Q6ZVD7 989 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 HOMER1Q86YM7 354 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 OSCARQ8IYS5 282 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 JMYQ8N9B5 988 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 NECTIN2Q92692 538 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 GOLGA1Q92805 767 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 SMARCE1Q969G3 411 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 UTP14AQ9BVJ6 771 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 CARD6Q9BX69 1037 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 NAA15Q9BXJ9 866 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 C19orf44Q9H6X5 657 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 TLR7Q9NYK1 1049 aaKnown RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 ABCC12Q96J65 1359 aa13.52□□□□□ -0.25
TRIM3-210ENST00000530724 SIPA1L3O60292 1781 aaPredicted RBP13.52□□□□□ -0.25
TRIM3-210ENST00000530724 WDR17Q8IZU2 1322 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 ERICH4A6NGS2 130 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 ZNF202O95125 648 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 CPP00450 1065 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 ZNF18P17022 549 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 PPP2R3AQ06190 1150 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 STK3Q13188 491 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-210ENST00000530724 TNNI3KQ59H18 835 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 NT5DC1Q5TFE4 455 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 SRLQ86TD4 932 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 PANX2Q96RD6 677 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 BOLA2Q9H3K6 86 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 DBNLQ9UJU6 430 aaKnown RBP13.51□□□□□ -0.25
TRIM3-210ENST00000530724 IQSEC3Q9UPP2 1182 aaPredicted RBP13.51□□□□□ -0.25
TRIM3-210ENST00000530724 FPGT-TNNI3KV9GXZ4 949 aa13.51□□□□□ -0.25
TRIM3-210ENST00000530724 DDX60Q8IY21 1712 aaKnown RBP13.5□□□□□ -0.25
TRIM3-210ENST00000530724 MYO1CO00159 1063 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
TRIM3-210ENST00000530724 HSP90B1P14625 803 aaKnown RBP13.5□□□□□ -0.25
TRIM3-210ENST00000530724 CEP112Q8N8E3 955 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 TRIML1Q8N9V2 468 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 TCEANC2Q96MN5 208 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 GBP3Q9H0R5 595 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 CCDC8Q9H0W5 538 aaPredicted RBP13.5□□□□□ -0.25
TRIM3-210ENST00000530724 VIPAS39Q9H9C1 493 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 ADAM21Q9UKJ8 722 aa13.5□□□□□ -0.25
TRIM3-210ENST00000530724 BTBD11A6QL63 1104 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 ZBTB22O15209 634 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
TRIM3-210ENST00000530724 URI1O94763 535 aaPredicted RBP13.49□□□□□ -0.25
TRIM3-210ENST00000530724 IGKV5-2P06315 115 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 UBASH3AP57075 661 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 APOBRQ0VD83 1088 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 PDIA6Q15084 440 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 STK38Q15208 465 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 LONRF2Q1L5Z9 754 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 TPRNQ4KMQ1 711 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 NOM1Q5C9Z4 860 aaKnown RBP13.49□□□□□ -0.25
TRIM3-210ENST00000530724 ANO1Q5XXA6 986 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 KRBA2Q6ZNG9 492 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 DDX54Q8TDD1 881 aaKnown RBP13.49□□□□□ -0.25
TRIM3-210ENST00000530724 PARD6BQ9BYG5 372 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 MYO1AQ9UBC5 1043 aa13.49□□□□□ -0.25
TRIM3-210ENST00000530724 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.49□□□□□ -0.25
TRIM3-210ENST00000530724 KDM6AO15550 1401 aaPredicted RBP13.48□□□□□ -0.25
TRIM3-210ENST00000530724 NEURL1BA8MQ27 555 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 E7EWF7 191 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 ERLIN1O75477 346 aa13.48□□□□□ -0.25
TRIM3-210ENST00000530724 TOP1P11387 765 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms