RNA–Protein interactions for RNA: ENST00000530579.6

NEDD8-MDP1-201, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 2

Gene NEDD8-MDP1, Length 471 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-201ENST00000530579 HIP1O00291 1037 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 RNF113AO15541 343 aaKnown RBP10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 IL1R1P14778 569 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 KIAA2012Q0VF49 1180 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 MAP3K12Q12852 859 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 C8orf34Q49A92 452 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ZSCAN25Q6NSZ9 544 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 WDR66Q8TBY9 1149 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 TAOK3Q9H2K8 898 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 RAI14Q9P0K7 980 aa10.29□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 ECE2O60344 883 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 IARSP41252 1262 aaKnown RBP10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 GTF2IP78347 998 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 SPTY2D1Q68D10 685 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 CWC27Q6UX04 472 aaKnown RBP10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 PODNQ7Z5L7 613 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 RUFY2Q8WXA3 655 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 BACH2Q9BYV9 841 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 VPS33BQ9H267 617 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 SLX4Q8IY92 1834 aa10.28□□□□□ -0.76
NEDD8-MDP1-201ENST00000530579 NFKBIEO00221 500 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 EIF5BO60841 1220 aaKnown RBP10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZFYP08048 801 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 NMIQ13287 307 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SLC9C2Q5TAH2 1124 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TTLL5Q6EMB2 1281 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ERICH6Q7L0X2 663 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 NIM1KQ8IY84 436 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZGPATQ8N5A5 531 aaKnown RBP10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 JDP2Q8WYK2 163 aa10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PDS5AQ29RF7 1337 aaKnown RBP10.27□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 KIF13BQ9NQT8 1826 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZBTB22O15209 634 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CHGBP05060 677 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LDHBP07195 334 aaKnown RBP10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MFAP1P55081 439 aaKnown RBP10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 RASSF7Q02833 373 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 GPR162Q16538 588 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TICAM2Q86XR7 235 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MAGEB6Q8N7X4 407 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TBC1D22AQ8WUA7 517 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 FAM227BQ96M60 508 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ESYT1Q9BSJ8 1104 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 KCNQ5Q9NR82 932 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZNRF3Q9ULT6 936 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SNED1Q8TER0 1413 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LRRC37AA6NMS7 1700 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 USP17L3A6NCW0 530 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 USP17L4A6NCW7 530 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SEC24BO95487 1268 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PDE6AP16499 860 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CYP7A1P22680 504 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ADD2P35612 726 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SLFNL1Q499Z3 407 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MCMDC2Q4G0Z9 681 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MFSD14BQ5SR56 506 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZMYM1Q5SVZ6 1142 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 KIAA1211Q6ZU35 1233 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 USP17L1Q7RTZ2 530 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 DZIP1Q86YF9 867 aaKnown RBP10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MXD3Q9BW11 206 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 UPF2Q9HAU5 1272 aaKnown RBP10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 HELLSQ9NRZ9 838 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 DUOX1Q9NRD9 1551 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ZNF532Q9HCE3 1301 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SALL1Q9NSC2 1324 aa10.25□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 COL1A1P02452 1464 aaPredicted RBP10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 A0A0D9SFI3 127 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 F8W031 263 aaPredicted RBP10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SGSM2O43147 1006 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 RAD17O75943 681 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 REC8O95072 547 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 YBX3P16989 372 aaKnown RBP eCLIP10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 PRDX5P30044 214 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 GSTO1P78417 241 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 MECOMQ03112 1051 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 UBE3CQ15386 1083 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 STRIP1Q5VSL9 837 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 NAA16Q6N069 864 aaPredicted RBP10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 APPBP2Q92624 585 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SEC62Q99442 399 aaKnown RBP10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ANO2Q9NQ90 1003 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LTBP3Q9NS15 1303 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 RFX7Q2KHR2 1363 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 KIAA1551Q9HCM1 1747 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 YDJCA8MPS7 323 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 M0R2C6 588 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LDHCP07864 332 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 LMNB1P20700 586 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 GRIK5Q16478 980 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 CCDC129Q6ZRS4 1044 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 SLF2Q8IX21 1173 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 NSUN4Q96CB9 384 aaKnown RBP10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 ARAP2Q8WZ64 1704 aa10.23□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 TCRBV5S4A2TA0A5A2 114 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 GRIN3BO60391 1043 aa10.22□□□□□ -0.77
NEDD8-MDP1-201ENST00000530579 IGSF3O75054 1194 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 161.1 ms