RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 SSC5DA1L4H1 1573 aa13.38□□□□□ -0.27
COPB1-207ENST00000529866 ZNF853P0CG23 659 aa13.38□□□□□ -0.27
COPB1-207ENST00000529866 KLRK1P26718 216 aa13.38□□□□□ -0.27
COPB1-207ENST00000529866 KSR2Q6VAB6 950 aa13.38□□□□□ -0.27
COPB1-207ENST00000529866 COLQQ9Y215 455 aaPredicted RBP13.38□□□□□ -0.27
COPB1-207ENST00000529866 CLRN2A0PK11 232 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 TESPA1A2RU30 521 aaPredicted RBP13.37□□□□□ -0.27
COPB1-207ENST00000529866 PI4KAP2A4QPH2 592 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 SPDYE2BA6NHP3 402 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 WDHD1O75717 1129 aaPredicted RBP13.37□□□□□ -0.27
COPB1-207ENST00000529866 IGKV5-2P06315 115 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 SPDYE6P0CI01 402 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 ITGA6P23229 1130 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 TNFAIP1Q13829 316 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 CFAP100Q494V2 611 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 PI4KAP1Q8N8J0 262 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 CD209Q9NNX6 404 aa13.37□□□□□ -0.27
COPB1-207ENST00000529866 GJA5P36382 358 aa13.36□□□□□ -0.27
COPB1-207ENST00000529866 NBPF12Q5TAG4 269 aaPredicted RBP13.36□□□□□ -0.27
COPB1-207ENST00000529866 UBE3BQ7Z3V4 1068 aa13.36□□□□□ -0.27
COPB1-207ENST00000529866 STK31Q9BXU1 1019 aa13.36□□□□□ -0.27
COPB1-207ENST00000529866 ZFYVE28Q9HCC9 887 aa13.36□□□□□ -0.27
COPB1-207ENST00000529866 PTCH2Q9Y6C5 1203 aa13.36□□□□□ -0.27
COPB1-207ENST00000529866 NEURL1BA8MQ27 555 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 F8W031 263 aaPredicted RBP13.35□□□□□ -0.27
COPB1-207ENST00000529866 RBM5P52756 815 aaKnown RBP eCLIP13.35□□□□□ -0.27
COPB1-207ENST00000529866 FKBP1AP62942 108 aaKnown RBP13.35□□□□□ -0.27
COPB1-207ENST00000529866 CHRNDQ07001 517 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 RASA3Q14644 834 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 TAF1CQ15572 869 aaPredicted RBP13.35□□□□□ -0.27
COPB1-207ENST00000529866 ZNF804AQ7Z570 1209 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 CERS5Q8N5B7 392 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 PTPN18Q99952 460 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 PLA2G12BQ9BX93 195 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 ELP3Q9H9T3 547 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 ADAMTS8Q9UP79 889 aa13.35□□□□□ -0.27
COPB1-207ENST00000529866 H7C1W4 665 aa13.34□□□□□ -0.27
COPB1-207ENST00000529866 USP2O75604 605 aaPredicted RBP13.34□□□□□ -0.27
COPB1-207ENST00000529866 GTF2A2P52657 109 aa13.34□□□□□ -0.27
COPB1-207ENST00000529866 KIF22Q14807 665 aa13.34□□□□□ -0.27
COPB1-207ENST00000529866 CWF19L2Q2TBE0 894 aaKnown RBP13.34□□□□□ -0.27
COPB1-207ENST00000529866 C15orf52Q6ZUT6 534 aaKnown RBP13.34□□□□□ -0.27
COPB1-207ENST00000529866 RBBP6Q7Z6E9 1792 aaKnown RBP13.33□□□□□ -0.28
COPB1-207ENST00000529866 CCL15-CCL14A0A0B4J2E2 113 aa13.33□□□□□ -0.28
COPB1-207ENST00000529866 H0YGN5 161 aa13.33□□□□□ -0.28
COPB1-207ENST00000529866 CCL15Q16663 113 aa13.33□□□□□ -0.28
COPB1-207ENST00000529866 C8orf58Q8NAV2 365 aa13.33□□□□□ -0.28
COPB1-207ENST00000529866 PRMT6Q96LA8 375 aaPredicted RBP13.33□□□□□ -0.28
COPB1-207ENST00000529866 MYH16Q9H6N6 1097 aa13.33□□□□□ -0.28
COPB1-207ENST00000529866 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 IL1R1P14778 569 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 BRI3BPQ8WY22 251 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 MS4A4AQ96JQ5 239 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 PCDHAC2Q9Y5I4 1007 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 CSADQ9Y600 493 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 RANBP2P49792 3224 aaKnown RBP13.32□□□□□ -0.28
COPB1-207ENST00000529866 SZT2Q5T011 3432 aa13.32□□□□□ -0.28
COPB1-207ENST00000529866 MYCP01106 439 aaPredicted RBP13.31□□□□□ -0.28
COPB1-207ENST00000529866 GNRH1P01148 92 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 CSF1RP07333 972 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 TNNI2P48788 182 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 CAP1Q01518 475 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 GCKRQ14397 625 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 SPDYE2Q495Y8 402 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 CHRDL2Q6WN34 429 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 OTUD5Q96G74 571 aa13.31□□□□□ -0.28
COPB1-207ENST00000529866 ZNF646O15015 1829 aaPredicted RBP13.3□□□□□ -0.28
COPB1-207ENST00000529866 APAF1O14727 1248 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 TAF5LO75529 589 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 PRMT2P55345 433 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 MAP3K9P80192 1104 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 IFIT5Q13325 482 aaKnown RBP13.3□□□□□ -0.28
COPB1-207ENST00000529866 VGLL4Q14135 290 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 ZCCHC17Q9NP64 241 aaKnown RBP13.3□□□□□ -0.28
COPB1-207ENST00000529866 ZNF70Q9UC06 446 aaPredicted RBP13.3□□□□□ -0.28
COPB1-207ENST00000529866 SERPINA10Q9UK55 444 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 IRS2Q9Y4H2 1338 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 CUL9Q8IWT3 2517 aa13.3□□□□□ -0.28
COPB1-207ENST00000529866 TLR2O60603 784 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 LACTBP83111 547 aaPredicted RBP13.29□□□□□ -0.28
COPB1-207ENST00000529866 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.29□□□□□ -0.28
COPB1-207ENST00000529866 FAM43AQ8N2R8 423 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 TSPYL6Q8N831 410 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.29□□□□□ -0.28
COPB1-207ENST00000529866 NKX2-3Q8TAU0 364 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 SH3TC2Q8TF17 1288 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 DPF3Q92784 378 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 JAG2Q9Y219 1238 aa13.29□□□□□ -0.28
COPB1-207ENST00000529866 SNAP23O00161 211 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 CETPP11597 493 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 TAF7LQ5H9L4 462 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 MFSD14BQ5SR56 506 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 HELBQ8NG08 1087 aaPredicted RBP13.28□□□□□ -0.28
COPB1-207ENST00000529866 LINS1Q8NG48 757 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 CNKSR2Q8WXI2 1034 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 PRKRIP1Q9H875 184 aaPredicted RBP13.28□□□□□ -0.28
COPB1-207ENST00000529866 TTF2Q9UNY4 1162 aaKnown RBP13.28□□□□□ -0.28
COPB1-207ENST00000529866 CHMP3Q9Y3E7 222 aa13.28□□□□□ -0.28
COPB1-207ENST00000529866 AOX1Q06278 1338 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms