RNA–Protein interactions for RNA: ENST00000529573.1

PDZD3-211, Transcript of PDZ domain containing 3, humanhuman

TSL 4

Gene PDZD3, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-211ENST00000529573 IGF2BP3O00425 579 aaKnown RBP eCLIP12.66□□□□□ -0.38
PDZD3-211ENST00000529573 PPP1R12BO60237 982 aaPredicted RBP12.66□□□□□ -0.38
PDZD3-211ENST00000529573 SLC4A2P04920 1241 aa12.66□□□□□ -0.38
PDZD3-211ENST00000529573 KCNJ4P48050 445 aa12.66□□□□□ -0.38
PDZD3-211ENST00000529573 OTOP1Q7RTM1 612 aa12.66□□□□□ -0.38
PDZD3-211ENST00000529573 ECM29Q5VYK3 1845 aa12.66□□□□□ -0.38
PDZD3-211ENST00000529573 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 SNAP23O00161 211 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 IL1R1P14778 569 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 FKBP1AP62942 108 aaKnown RBP12.65□□□□□ -0.38
PDZD3-211ENST00000529573 TWISTNBQ3B726 338 aaPredicted RBP12.65□□□□□ -0.38
PDZD3-211ENST00000529573 INTS3Q68E01 1043 aaKnown RBP12.65□□□□□ -0.38
PDZD3-211ENST00000529573 GCC1Q96CN9 775 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 TRIM17Q9Y577 477 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
PDZD3-211ENST00000529573 A0A1B0GUL6 1792 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 ANKRD18BA2A2Z9 1011 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 POTEFA5A3E0 1075 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 GJA5P36382 358 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 FLIIQ13045 1269 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 CCDC27Q2M243 656 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 SUPT20HL1Q3ZLR7 823 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 CFAP100Q494V2 611 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 LINS1Q8NG48 757 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 DNAAF4Q8WXU2 420 aa12.64□□□□□ -0.39
PDZD3-211ENST00000529573 PRMT6Q96LA8 375 aaPredicted RBP12.64□□□□□ -0.39
PDZD3-211ENST00000529573 AOX1Q06278 1338 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 TESPA1A2RU30 521 aaPredicted RBP12.63□□□□□ -0.39
PDZD3-211ENST00000529573 MYO1BO43795 1136 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 TAF5LO75529 589 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 NBPF12Q5TAG4 269 aaPredicted RBP12.63□□□□□ -0.39
PDZD3-211ENST00000529573 WWC1Q8IX03 1113 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 HELBQ8NG08 1087 aaPredicted RBP12.63□□□□□ -0.39
PDZD3-211ENST00000529573 ERO1AQ96HE7 468 aa12.63□□□□□ -0.39
PDZD3-211ENST00000529573 RBBP6Q7Z6E9 1792 aaKnown RBP12.63□□□□□ -0.39
PDZD3-211ENST00000529573 F8W031 263 aaPredicted RBP12.62□□□□□ -0.39
PDZD3-211ENST00000529573 USP2O75604 605 aaPredicted RBP12.62□□□□□ -0.39
PDZD3-211ENST00000529573 FOXO4P98177 505 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 CRHR2Q13324 411 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 FKBP5Q13451 457 aaPredicted RBP12.62□□□□□ -0.39
PDZD3-211ENST00000529573 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 ARMC5Q96C12 935 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 PTPN18Q99952 460 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 PTPN22Q9Y2R2 807 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 IL16Q14005 1332 aa12.62□□□□□ -0.39
PDZD3-211ENST00000529573 CACNA1FO60840 1977 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 IREB2P48200 963 aaKnown RBP12.61□□□□□ -0.39
PDZD3-211ENST00000529573 CAP1Q01518 475 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 IFIT5Q13325 482 aaKnown RBP12.61□□□□□ -0.39
PDZD3-211ENST00000529573 RASA3Q14644 834 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 HABP4Q5JVS0 413 aaKnown RBP12.61□□□□□ -0.39
PDZD3-211ENST00000529573 OTUD7BQ6GQQ9 843 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 ANKRD13AQ8IZ07 590 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 CD99L2Q8TCZ2 262 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 VEZTQ9HBM0 779 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.61□□□□□ -0.39
PDZD3-211ENST00000529573 CEP290O15078 2479 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 FAM205AQ6ZU69 1335 aa12.61□□□□□ -0.39
PDZD3-211ENST00000529573 EFCC1Q9HA90 598 aa12.6□□□□□ -0.39
PDZD3-211ENST00000529573 RANBP2P49792 3224 aaKnown RBP12.6□□□□□ -0.39
PDZD3-211ENST00000529573 OTOFQ9HC10 1997 aa12.6□□□□□ -0.39
PDZD3-211ENST00000529573 SP3Q02447 781 aa12.59□□□□□ -0.39
PDZD3-211ENST00000529573 SPDYE2Q495Y8 402 aa12.59□□□□□ -0.39
PDZD3-211ENST00000529573 NCBP3Q53F19 620 aaKnown RBP12.59□□□□□ -0.39
PDZD3-211ENST00000529573 MS4A4AQ96JQ5 239 aa12.59□□□□□ -0.39
PDZD3-211ENST00000529573 TEPSINQ96N21 525 aa12.59□□□□□ -0.39
PDZD3-211ENST00000529573 JAG2Q9Y219 1238 aa12.59□□□□□ -0.39
PDZD3-211ENST00000529573 VAMP4O75379 141 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 EN2P19622 333 aaPredicted RBP12.58□□□□□ -0.4
PDZD3-211ENST00000529573 RBM5P52756 815 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDZD3-211ENST00000529573 TNFAIP1Q13829 316 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 EPHA10Q5JZY3 1008 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 BEND3Q5T5X7 828 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 LMBR1LQ6UX01 489 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 LDHAL6AQ6ZMR3 332 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 TDRD7Q8NHU6 1098 aaKnown RBP12.58□□□□□ -0.4
PDZD3-211ENST00000529573 OPTNQ96CV9 577 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 ZNF70Q9UC06 446 aaPredicted RBP12.58□□□□□ -0.4
PDZD3-211ENST00000529573 SERPINA10Q9UK55 444 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 CHMP3Q9Y3E7 222 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 SZT2Q5T011 3432 aa12.58□□□□□ -0.4
PDZD3-211ENST00000529573 F6X3S4 739 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 CCDC57Q2TAC2 916 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 CCDC184Q52MB2 194 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 MFSD14BQ5SR56 506 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.57□□□□□ -0.4
PDZD3-211ENST00000529573 CDAN1Q8IWY9 1227 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 BRI3BPQ8WY22 251 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 ZNF594Q96JF6 807 aaPredicted RBP12.57□□□□□ -0.4
PDZD3-211ENST00000529573 ZNF333Q96JL9 665 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 ELP3Q9H9T3 547 aa12.57□□□□□ -0.4
PDZD3-211ENST00000529573 PLIN1O60240 522 aa12.56□□□□□ -0.4
PDZD3-211ENST00000529573 UBE4AQ14139 1066 aa12.56□□□□□ -0.4
PDZD3-211ENST00000529573 DZIP1LQ8IYY4 767 aaKnown RBP12.56□□□□□ -0.4
PDZD3-211ENST00000529573 CNKSR2Q8WXI2 1034 aa12.56□□□□□ -0.4
PDZD3-211ENST00000529573 TDRD3Q9H7E2 651 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms