RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 CEP290O15078 2479 aa15.05■□□□□ -0
AMBRA1-207ENST00000529553 SSC5DA1L4H1 1573 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 TAF1CQ15572 869 aaPredicted RBP15.04■□□□□ -0
AMBRA1-207ENST00000529553 DUSP27Q5VZP5 1158 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 OPTNQ96CV9 577 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 HTATIP2Q9BUP3 242 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 METTL22Q9BUU2 404 aaPredicted RBP15.04■□□□□ -0
AMBRA1-207ENST00000529553 NR2E3Q9Y5X4 410 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 A0A0C4DFX4 3053 aa15.04■□□□□ -0
AMBRA1-207ENST00000529553 RANBP2P49792 3224 aaKnown RBP15.04■□□□□ -0
AMBRA1-207ENST00000529553 SPDYE2BA6NHP3 402 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 SPDYE6P0CI01 402 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 FKBP1AP62942 108 aaKnown RBP15.03■□□□□ -0
AMBRA1-207ENST00000529553 SH3TC2Q8TF17 1288 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 BRI3BPQ8WY22 251 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 CHMP4AQ9BY43 222 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 CD209Q9NNX6 404 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 ZCCHC17Q9NP64 241 aaKnown RBP15.03■□□□□ -0
AMBRA1-207ENST00000529553 LAMB1P07942 1786 aa15.03■□□□□ -0
AMBRA1-207ENST00000529553 CCL15-CCL14A0A0B4J2E2 113 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 TLR2O60603 784 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 DDX58O95786 925 aaKnown RBP15.02■□□□□ -0
AMBRA1-207ENST00000529553 IGHMBP2P38935 993 aaKnown RBP15.02■□□□□ -0
AMBRA1-207ENST00000529553 RASA3Q14644 834 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 CCL15Q16663 113 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 CFAP100Q494V2 611 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 UBE2Q1Q7Z7E8 422 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 JARID2Q92833 1246 aaPredicted RBP15.02■□□□□ -0
AMBRA1-207ENST00000529553 PRMT6Q96LA8 375 aaPredicted RBP15.02■□□□□ -0
AMBRA1-207ENST00000529553 GREM2Q9H772 168 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 PHAXQ9H814 394 aaKnown RBP15.02■□□□□ -0
AMBRA1-207ENST00000529553 ELP3Q9H9T3 547 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 TRIM35Q9UPQ4 493 aa15.02■□□□□ -0
AMBRA1-207ENST00000529553 CAPN2P17655 700 aa15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 LACTBP83111 547 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 TNFAIP1Q13829 316 aa15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 C15orf52Q6ZUT6 534 aaKnown RBP15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 CERS5Q8N5B7 392 aa15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 HELBQ8NG08 1087 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-207ENST00000529553 CLRN2A0PK11 232 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 MYCP01106 439 aaPredicted RBP15□□□□□ -0.01
AMBRA1-207ENST00000529553 GJB1P08034 283 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 GJA8P48165 433 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 MAP3K9P80192 1104 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 PPP1R3FQ6ZSY5 799 aaPredicted RBP15□□□□□ -0.01
AMBRA1-207ENST00000529553 SHISA4Q96DD7 197 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 VEZTQ9HBM0 779 aa15□□□□□ -0.01
AMBRA1-207ENST00000529553 ZBTB7BO15156 539 aaPredicted RBP14.99□□□□□ -0.01
AMBRA1-207ENST00000529553 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
AMBRA1-207ENST00000529553 GPR153Q6NV75 609 aa14.99□□□□□ -0.01
AMBRA1-207ENST00000529553 FAM43AQ8N2R8 423 aa14.99□□□□□ -0.01
AMBRA1-207ENST00000529553 CETPP11597 493 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 IL1R1P14778 569 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 KLRK1P26718 216 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 HOXD10P28358 340 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 KCNJ4P48050 445 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 MPHOSPH8Q99549 860 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 PCDHAC2Q9Y5I4 1007 aa14.98□□□□□ -0.01
AMBRA1-207ENST00000529553 ZNF646O15015 1829 aaPredicted RBP14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 MTFR1Q15390 333 aa14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 TEPSINQ96N21 525 aa14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 ARHGAP39Q9C0H5 1083 aa14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 SRRDQ9UH36 339 aa14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 CSADQ9Y600 493 aa14.97□□□□□ -0.01
AMBRA1-207ENST00000529553 IRS2Q9Y4H2 1338 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 H7C1W4 665 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 IGKV5-2P06315 115 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 ZNF853P0CG23 659 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 ITGA6P23229 1130 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 GRK4P32298 578 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 RBM5P52756 815 aaKnown RBP eCLIP14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 VGLL4Q14135 290 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 SPDYE2Q495Y8 402 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 C17orf99Q6UX52 265 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 KSR2Q6VAB6 950 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 RUNDC1Q96C34 613 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 PLA2G12BQ9BX93 195 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 MBIPQ9NS73 344 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 ZNF70Q9UC06 446 aaPredicted RBP14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 MAP3K2Q9Y2U5 619 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 COL6A3P12111 3177 aa14.96□□□□□ -0.01
AMBRA1-207ENST00000529553 CUL9Q8IWT3 2517 aa14.96□□□□□ -0.02
AMBRA1-207ENST00000529553 SPDYE5A6NIY4 337 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 BTBD19C9JJ37 291 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 F8W031 263 aaPredicted RBP14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 CSF1RP07333 972 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 CHRNDQ07001 517 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 ZNF804AQ7Z570 1209 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 CNKSR2Q8WXI2 1034 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 TRIM47Q96LD4 638 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 SERPINA10Q9UK55 444 aa14.95□□□□□ -0.02
AMBRA1-207ENST00000529553 CCL5P13501 91 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 TNNI2P48788 182 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 UBXN2AP68543 259 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 SNAPC2Q13487 334 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 CCDC30Q5VVM6 783 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 ERO1BQ86YB8 467 aa14.94□□□□□ -0.02
AMBRA1-207ENST00000529553 RAET1EQ8TD07 263 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms