RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 PDE1AP54750 535 aa14.34□□□□□ -0.11
C9orf135-207ENST00000529446 FKBP1AP62942 108 aaKnown RBP14.34□□□□□ -0.11
C9orf135-207ENST00000529446 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
C9orf135-207ENST00000529446 C16orf71Q8IYS4 520 aaPredicted RBP14.34□□□□□ -0.11
C9orf135-207ENST00000529446 WDR66Q8TBY9 1149 aa14.34□□□□□ -0.11
C9orf135-207ENST00000529446 DICER1Q9UPY3 1922 aaKnown RBP14.34□□□□□ -0.11
C9orf135-207ENST00000529446 MYO3BQ8WXR4 1341 aa14.34□□□□□ -0.11
C9orf135-207ENST00000529446 RASGRF1Q13972 1273 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 PLEKHM2Q8IWE5 1019 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 ZGPATQ8N5A5 531 aaKnown RBP14.33□□□□□ -0.12
C9orf135-207ENST00000529446 SPATA5Q8NB90 893 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 BCL11AQ9H165 835 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 HMG20BQ9P0W2 317 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 SUGT1Q9Y2Z0 365 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 SALL1Q9NSC2 1324 aa14.33□□□□□ -0.12
C9orf135-207ENST00000529446 YDJCA8MPS7 323 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 MCAMP43121 646 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 MMP14P50281 582 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 TTLL5Q6EMB2 1281 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 CIAPIN1Q6FI81 312 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 OTUD7AQ8TE49 926 aaPredicted RBP14.32□□□□□ -0.12
C9orf135-207ENST00000529446 HAUS7Q99871 368 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 TIAM2Q8IVF5 1701 aa14.32□□□□□ -0.12
C9orf135-207ENST00000529446 VIL1P09327 827 aaKnown RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 RPS12P25398 132 aaKnown RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 PDE4AP27815 886 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 GTF2IP78347 998 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 CXCL9Q07325 125 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 DACT2Q5SW24 774 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 SPTY2D1Q68D10 685 aaPredicted RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 DPY19L2Q6NUT2 758 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 TMED8Q6PL24 325 aaPredicted RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 TICAM2Q86XR7 235 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 GPC2Q8N158 579 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 PI4K2BQ8TCG2 481 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 IQSEC3Q9UPP2 1182 aaPredicted RBP14.31□□□□□ -0.12
C9orf135-207ENST00000529446 UTRNP46939 3433 aa14.31□□□□□ -0.12
C9orf135-207ENST00000529446 PSME4Q14997 1843 aa14.3□□□□□ -0.12
C9orf135-207ENST00000529446 CHAF1AQ13111 956 aaPredicted RBP14.3□□□□□ -0.12
C9orf135-207ENST00000529446 SCARF1Q14162 830 aa14.3□□□□□ -0.12
C9orf135-207ENST00000529446 RSBN1LQ6PCB5 846 aaPredicted RBP14.3□□□□□ -0.12
C9orf135-207ENST00000529446 AGBL3Q8NEM8 1001 aa14.3□□□□□ -0.12
C9orf135-207ENST00000529446 COL1A1P02452 1464 aaPredicted RBP14.3□□□□□ -0.12
C9orf135-207ENST00000529446 CCDC88AQ3V6T2 1871 aa14.29□□□□□ -0.12
C9orf135-207ENST00000529446 RAD17O75943 681 aa14.29□□□□□ -0.12
C9orf135-207ENST00000529446 MFSD14BQ5SR56 506 aa14.29□□□□□ -0.12
C9orf135-207ENST00000529446 FBXW7Q969H0 707 aa14.29□□□□□ -0.12
C9orf135-207ENST00000529446 BOLA2Q9H3K6 86 aa14.29□□□□□ -0.12
C9orf135-207ENST00000529446 PSMD14O00487 310 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 MAST3O60307 1309 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 CYP2E1P05181 493 aaPredicted RBP14.28□□□□□ -0.12
C9orf135-207ENST00000529446 ZAP70P43403 619 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 LRRFIP1Q32MZ4 808 aaKnown RBP14.28□□□□□ -0.12
C9orf135-207ENST00000529446 DPF2Q92785 391 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 ZNF541Q9H0D2 1346 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 KCNQ5Q9NR82 932 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 PAG1Q9NWQ8 432 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 MYH13Q9UKX3 1938 aa14.28□□□□□ -0.12
C9orf135-207ENST00000529446 CHD4Q14839 1912 aa14.27□□□□□ -0.12
C9orf135-207ENST00000529446 LDHBP07195 334 aaKnown RBP14.27□□□□□ -0.13
C9orf135-207ENST00000529446 TSHZ3Q63HK5 1081 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 GMLQ99445 158 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 DNAJC2Q99543 621 aaKnown RBP14.27□□□□□ -0.13
C9orf135-207ENST00000529446 MRIQ9BWK5 157 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 SNRKQ9NRH2 765 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 SCN9AQ15858 1988 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 AKAP11Q9UKA4 1901 aa14.27□□□□□ -0.13
C9orf135-207ENST00000529446 GLTPD2A6NH11 291 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 GOLIM4O00461 696 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 HDLBPQ00341 1268 aaKnown RBP14.26□□□□□ -0.13
C9orf135-207ENST00000529446 MAP3K12Q12852 859 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 TTC22Q5TAA0 569 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 ZSCAN25Q6NSZ9 544 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 PI16Q6UXB8 463 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 ERICH6Q7L0X2 663 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 SLF2Q8IX21 1173 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 OGFOD1Q8N543 542 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 EVI5LQ96CN4 794 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 L3MBTL3Q96JM7 780 aaPredicted RBP14.26□□□□□ -0.13
C9orf135-207ENST00000529446 LRP2BPQ9P2M1 347 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 ABCF2Q9UG63 623 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 GJA3Q9Y6H8 435 aa14.26□□□□□ -0.13
C9orf135-207ENST00000529446 ZNF646O15015 1829 aaPredicted RBP14.26□□□□□ -0.13
C9orf135-207ENST00000529446 RFX7Q2KHR2 1363 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 GSTO1P78417 241 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 CNTROBQ8N137 903 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 CERS5Q8N5B7 392 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 KBTBD3Q8NAB2 608 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
C9orf135-207ENST00000529446 HDAC9Q9UKV0 1011 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 JAG2Q9Y219 1238 aa14.25□□□□□ -0.13
C9orf135-207ENST00000529446 ZFYP08048 801 aaPredicted RBP14.24□□□□□ -0.13
C9orf135-207ENST00000529446 USP17L8P0C7I0 530 aa14.24□□□□□ -0.13
C9orf135-207ENST00000529446 LMOD1P29536 600 aaPredicted RBP14.24□□□□□ -0.13
C9orf135-207ENST00000529446 RGS3P49796 1198 aa14.24□□□□□ -0.13
C9orf135-207ENST00000529446 GMPSP49915 693 aaPredicted RBP14.24□□□□□ -0.13
C9orf135-207ENST00000529446 BMP2KLQ5H9B9 411 aa14.24□□□□□ -0.13
C9orf135-207ENST00000529446 DZIP1Q86YF9 867 aaKnown RBP14.24□□□□□ -0.13
C9orf135-207ENST00000529446 PIH1D3Q9NQM4 214 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms