RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 NEK4P51957 841 aa14.13□□□□□ -0.15
USF1-208ENST00000528768 LRP10Q7Z4F1 713 aa14.13□□□□□ -0.15
USF1-208ENST00000528768 C2orf69Q8N8R5 385 aa14.13□□□□□ -0.15
USF1-208ENST00000528768 RTFDC1Q9BY42 306 aaPredicted RBP14.13□□□□□ -0.15
USF1-208ENST00000528768 CWC25Q9NXE8 425 aaPredicted RBP14.13□□□□□ -0.15
USF1-208ENST00000528768 H7C1D1 291 aa14.12□□□□□ -0.15
USF1-208ENST00000528768 HSPA4P34932 840 aa14.12□□□□□ -0.15
USF1-208ENST00000528768 PIP4K2AP48426 406 aaPredicted RBP14.12□□□□□ -0.15
USF1-208ENST00000528768 AOC3Q16853 763 aa14.12□□□□□ -0.15
USF1-208ENST00000528768 RABL6Q3YEC7 729 aaPredicted RBP14.12□□□□□ -0.15
USF1-208ENST00000528768 TNPO1Q92973 898 aaKnown RBP14.12□□□□□ -0.15
USF1-208ENST00000528768 PA2G4Q9UQ80 394 aaKnown RBP14.12□□□□□ -0.15
USF1-208ENST00000528768 ATP6V0A2Q9Y487 856 aa14.12□□□□□ -0.15
USF1-208ENST00000528768 RAD50Q92878 1312 aa14.12□□□□□ -0.15
USF1-208ENST00000528768 ABCC12Q96J65 1359 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 FAM155AB1AL88 458 aaPredicted RBP14.11□□□□□ -0.15
USF1-208ENST00000528768 NBPF26B4DH59 902 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 TRAK2O60296 914 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 CD2BP2O95400 341 aaKnown RBP14.11□□□□□ -0.15
USF1-208ENST00000528768 HLFQ16534 295 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 NBPF10Q6P3W6 841 aaKnown RBP14.11□□□□□ -0.15
USF1-208ENST00000528768 CCDC191Q8NCU4 936 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 KAZALD1Q96I82 304 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 RNF186Q9NXI6 227 aa14.11□□□□□ -0.15
USF1-208ENST00000528768 TRPA1O75762 1119 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 KIF23Q02241 960 aaPredicted RBP14.1□□□□□ -0.15
USF1-208ENST00000528768 KIF6Q6ZMV9 814 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 CLEC17AQ6ZS10 378 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 UBE3BQ7Z3V4 1068 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 TICAM2Q86XR7 235 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 DPF2Q92785 391 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 INTS4Q96HW7 963 aaKnown RBP14.1□□□□□ -0.15
USF1-208ENST00000528768 ZIC5Q96T25 663 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 GBA2Q9HCG7 927 aaPredicted RBP14.1□□□□□ -0.15
USF1-208ENST00000528768 FOXD4L1Q9NU39 408 aa14.1□□□□□ -0.15
USF1-208ENST00000528768 ISY1Q9ULR0 285 aaKnown RBP14.1□□□□□ -0.15
USF1-208ENST00000528768 AK9Q5TCS8 1911 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 H7C1W4 665 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 SASH1O94885 1247 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 MAP4K4O95819 1239 aaPredicted RBP14.09□□□□□ -0.15
USF1-208ENST00000528768 ZNF157P51786 506 aaPredicted RBP14.09□□□□□ -0.15
USF1-208ENST00000528768 HIRAP54198 1017 aaPredicted RBP14.09□□□□□ -0.15
USF1-208ENST00000528768 KIAA2012Q0VF49 1180 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 USP48Q86UV5 1035 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 NLRP3Q96P20 1036 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 CNOT7Q9UIV1 285 aaKnown RBP14.09□□□□□ -0.15
USF1-208ENST00000528768 MAP3K15Q6ZN16 1313 aa14.09□□□□□ -0.15
USF1-208ENST00000528768 ATP5J2-PTCD1G3V325 749 aa14.08□□□□□ -0.16
USF1-208ENST00000528768 BBOX1O75936 387 aa14.08□□□□□ -0.16
USF1-208ENST00000528768 ZKSCAN1P17029 563 aaPredicted RBP14.08□□□□□ -0.16
USF1-208ENST00000528768 HSP90AB3PQ58FF7 597 aa14.08□□□□□ -0.16
USF1-208ENST00000528768 CWC27Q6UX04 472 aaKnown RBP14.08□□□□□ -0.16
USF1-208ENST00000528768 DPP8Q6V1X1 898 aaPredicted RBP14.08□□□□□ -0.16
USF1-208ENST00000528768 SIL1Q9H173 461 aa14.08□□□□□ -0.16
USF1-208ENST00000528768 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
USF1-208ENST00000528768 AKAP11Q9UKA4 1901 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 PARP10Q53GL7 1025 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 RNF20Q5VTR2 975 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 KRT26Q7Z3Y9 468 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 SP8Q8IXZ3 490 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 MPNDQ8N594 471 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 TRPM4Q8TD43 1214 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 DCPSQ96C86 337 aaKnown RBP14.07□□□□□ -0.16
USF1-208ENST00000528768 EAF2Q96CJ1 260 aaPredicted RBP14.07□□□□□ -0.16
USF1-208ENST00000528768 FSD1Q9BTV5 496 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 LSG1Q9H089 658 aaKnown RBP14.07□□□□□ -0.16
USF1-208ENST00000528768 CCDC8Q9H0W5 538 aaPredicted RBP14.07□□□□□ -0.16
USF1-208ENST00000528768 GPR108Q9NPR9 543 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 RFX7Q2KHR2 1363 aa14.07□□□□□ -0.16
USF1-208ENST00000528768 SLC10A3P09131 477 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 ATP5JP18859 108 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 RPS12P25398 132 aaKnown RBP14.06□□□□□ -0.16
USF1-208ENST00000528768 PSMA5P28066 241 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 IL15P40933 162 aaPredicted RBP14.06□□□□□ -0.16
USF1-208ENST00000528768 KCNJ4P48050 445 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 CUL4AQ13619 759 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 TMC4Q7Z404 712 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 MICALL2Q8IY33 904 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 TMX3Q96JJ7 454 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 FBXO3Q9UK99 471 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 CHMP3Q9Y3E7 222 aa14.06□□□□□ -0.16
USF1-208ENST00000528768 GOLGA6L3A6NEY3 463 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 RAD17O75943 681 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 RFX5P48382 616 aaPredicted RBP14.05□□□□□ -0.16
USF1-208ENST00000528768 PTPN12Q05209 780 aaKnown RBP14.05□□□□□ -0.16
USF1-208ENST00000528768 TRIM28Q13263 835 aaKnown RBP14.05□□□□□ -0.16
USF1-208ENST00000528768 LRRFIP1Q32MZ4 808 aaKnown RBP14.05□□□□□ -0.16
USF1-208ENST00000528768 TNNI3KQ59H18 835 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 EPHA10Q5JZY3 1008 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 SLC10A5Q5PT55 438 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 LMBR1LQ6UX01 489 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 ZNF34Q8IZ26 560 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 ZSCAN31Q96LW9 406 aaPredicted RBP14.05□□□□□ -0.16
USF1-208ENST00000528768 CSRNP1Q96S65 589 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 TM6SF1Q9BZW5 370 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 HDAC9Q9UKV0 1011 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 FPGT-TNNI3KV9GXZ4 949 aa14.05□□□□□ -0.16
USF1-208ENST00000528768 NUP98P52948 1817 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 CIAO1O76071 339 aa14.04□□□□□ -0.16
USF1-208ENST00000528768 NTSR2O95665 410 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms