RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 TFIP11Q9UBB9 837 aaKnown RBP18.05■□□□□ 0.48
USH1C-207ENST00000527720 SLIT2O94813 1529 aa18.05■□□□□ 0.48
USH1C-207ENST00000527720 DDB1Q16531 1140 aa18.05■□□□□ 0.48
USH1C-207ENST00000527720 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
USH1C-207ENST00000527720 NCOA7Q8NI08 942 aa18.05■□□□□ 0.48
USH1C-207ENST00000527720 LPIN2Q92539 896 aa18.05■□□□□ 0.48
USH1C-207ENST00000527720 CCDC87Q9NVE4 849 aa18.05■□□□□ 0.48
USH1C-207ENST00000527720 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.05■□□□□ 0.48
USH1C-207ENST00000527720 CHD4Q14839 1912 aa18.04■□□□□ 0.48
USH1C-207ENST00000527720 LIG1P18858 919 aa18.04■□□□□ 0.48
USH1C-207ENST00000527720 RBM43Q6ZSC3 357 aaKnown RBP18.04■□□□□ 0.48
USH1C-207ENST00000527720 ZNF831Q5JPB2 1677 aa18.04■□□□□ 0.48
USH1C-207ENST00000527720 MYH14Q7Z406 1995 aaKnown RBP18.04■□□□□ 0.48
USH1C-207ENST00000527720 ZNF213O14771 459 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 DHX16O60231 1041 aaKnown RBP18.03■□□□□ 0.48
USH1C-207ENST00000527720 FGFR2P21802 821 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 PARP10Q53GL7 1025 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 INTS5Q6P9B9 1019 aaKnown RBP18.03■□□□□ 0.48
USH1C-207ENST00000527720 PI16Q6UXB8 463 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 KDM4AO75164 1064 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 CCT2P78371 535 aaKnown RBP18.03■□□□□ 0.48
USH1C-207ENST00000527720 CCDC102BQ68D86 513 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 RGS22Q8NE09 1264 aa18.03■□□□□ 0.48
USH1C-207ENST00000527720 SLC9C2Q5TAH2 1124 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 RALYLQ86SE5 291 aaKnown RBP18.02■□□□□ 0.48
USH1C-207ENST00000527720 DACT1Q9NYF0 836 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 BCORQ6W2J9 1755 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 CARMIL3Q8ND23 1372 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 C4AP0C0L4 1744 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 C4BP0C0L5 1744 aa18.02■□□□□ 0.48
USH1C-207ENST00000527720 COL5A3P25940 1745 aaPredicted RBP18.02■□□□□ 0.48
USH1C-207ENST00000527720 PRC1O43663 620 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 PTMAP06454 111 aaKnown RBP18.02■□□□□ 0.47
USH1C-207ENST00000527720 PGBD1Q96JS3 809 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 ZNF396Q96N95 335 aaPredicted RBP18.02■□□□□ 0.47
USH1C-207ENST00000527720 NAP1L5Q96NT1 182 aaPredicted RBP18.02■□□□□ 0.47
USH1C-207ENST00000527720 TNMDQ9H2S6 317 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 CLSTN2Q9H4D0 955 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 USP25Q9UHP3 1055 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 RTL9Q8NET4 1388 aa18.02■□□□□ 0.47
USH1C-207ENST00000527720 OFD1O75665 1012 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 ADD1P35611 737 aaKnown RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 HAND2P61296 217 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 CHST3Q7LGC8 479 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 UTP14AQ9BVJ6 771 aaKnown RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 RCOR1Q9UKL0 485 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 ZMYM6O95789 1325 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 SLC5A1P13866 664 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 CRKLP46109 303 aaKnown RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 SUSD4Q5VX71 490 aa18.01■□□□□ 0.47
USH1C-207ENST00000527720 PIH1D3Q9NQM4 214 aaKnown RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 NAP1L2Q9ULW6 460 aaPredicted RBP18.01■□□□□ 0.47
USH1C-207ENST00000527720 ADCY5O95622 1261 aa18■□□□□ 0.47
USH1C-207ENST00000527720 ATP6V1AP38606 617 aa18■□□□□ 0.47
USH1C-207ENST00000527720 PHKA1P46020 1223 aa18■□□□□ 0.47
USH1C-207ENST00000527720 FAM200AQ8TCP9 573 aa18■□□□□ 0.47
USH1C-207ENST00000527720 BICD2Q8TD16 824 aa18■□□□□ 0.47
USH1C-207ENST00000527720 LOC102724428A0A0B4J2F2 783 aa18■□□□□ 0.47
USH1C-207ENST00000527720 SIK1P57059 783 aa18■□□□□ 0.47
USH1C-207ENST00000527720 TRDNQ13061 729 aa18■□□□□ 0.47
USH1C-207ENST00000527720 CAMTA2O94983 1202 aa17.99■□□□□ 0.47
USH1C-207ENST00000527720 PDE6AP16499 860 aa17.99■□□□□ 0.47
USH1C-207ENST00000527720 TYRO3Q06418 890 aa17.99■□□□□ 0.47
USH1C-207ENST00000527720 ALX1Q15699 326 aa17.99■□□□□ 0.47
USH1C-207ENST00000527720 ZNF532Q9HCE3 1301 aa17.99■□□□□ 0.47
USH1C-207ENST00000527720 TCRBV5S4A2TA0A5A2 114 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 IDH1O75874 414 aaKnown RBP17.98■□□□□ 0.47
USH1C-207ENST00000527720 ANTXR2P58335 489 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 BARGINQ6ZT62 677 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 MPHOSPH8Q99549 860 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.98■□□□□ 0.47
USH1C-207ENST00000527720 SPATA31A5Q5VU36 1347 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 SPATA31A7Q8IWB4 1347 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 KLF18A0A0U1RQI7 1052 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 FDPSP14324 419 aaKnown RBP17.98■□□□□ 0.47
USH1C-207ENST00000527720 CCDC152Q4G0S7 254 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 MRVI1Q9Y6F6 885 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 LTBP4Q8N2S1 1624 aa17.98■□□□□ 0.47
USH1C-207ENST00000527720 NR1I2O75469 434 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 CAVIN2O95810 425 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
USH1C-207ENST00000527720 SPATA5Q8NB90 893 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 SMARCC1Q92922 1105 aaPredicted RBP17.97■□□□□ 0.47
USH1C-207ENST00000527720 ANO8Q9HCE9 1232 aaPredicted RBP17.97■□□□□ 0.47
USH1C-207ENST00000527720 HPS5Q9UPZ3 1129 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 CASZ1Q86V15 1759 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 CAMK4Q16566 473 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 A0A1B0GUL6 1792 aa17.97■□□□□ 0.47
USH1C-207ENST00000527720 GOLGA8BA8MQT2 603 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 CTAGE5O15320 804 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 TERF1P54274 439 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 MAP3K12Q12852 859 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 NBPF3Q9H094 633 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 TIAM2Q8IVF5 1701 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 ADAMTS2O95450 1211 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 NTSR2O95665 410 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 AIDAQ96BJ3 306 aa17.96■□□□□ 0.47
USH1C-207ENST00000527720 STRBPQ96SI9 672 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms