RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 SNAP23O00161 211 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 ZBTB7BO15156 539 aaPredicted RBP12.7□□□□□ -0.38
CAPN1-210ENST00000527699 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 CCT4P50991 539 aaKnown RBP12.7□□□□□ -0.38
CAPN1-210ENST00000527699 NEXNQ0ZGT2 675 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 GPR153Q6NV75 609 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 GMLQ99445 158 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 STK31Q9BXU1 1019 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 PTCH2Q9Y6C5 1203 aa12.7□□□□□ -0.38
CAPN1-210ENST00000527699 TWISTNBQ3B726 338 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-210ENST00000527699 HELBQ8NG08 1087 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-210ENST00000527699 BSDC1Q9NW68 430 aaPredicted RBP12.69□□□□□ -0.38
CAPN1-210ENST00000527699 TMEM265A0A087WTH1 108 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 IGHMBP2P38935 993 aaKnown RBP12.68□□□□□ -0.38
CAPN1-210ENST00000527699 DACT2Q5SW24 774 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 PODNQ7Z5L7 613 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 IFNL1Q8IU54 200 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 KIAA0825Q8IV33 1275 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 SH3TC2Q8TF17 1288 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 JAG2Q9Y219 1238 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 PCDHAC2Q9Y5I4 1007 aa12.68□□□□□ -0.38
CAPN1-210ENST00000527699 F8W031 263 aaPredicted RBP12.67□□□□□ -0.38
CAPN1-210ENST00000527699 H7C1W4 665 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 PLIN1O60240 522 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 TAF5LO75529 589 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 ITGA6P23229 1130 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 NF2P35240 595 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 KCNJ4P48050 445 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 GTF2IP78347 998 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 SP3Q02447 781 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 TTLL5Q6EMB2 1281 aa12.67□□□□□ -0.38
CAPN1-210ENST00000527699 RPTORQ8N122 1335 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 TTC28Q96AY4 2481 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 WNT10BO00744 389 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 EVI5O60447 810 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 HOXD11P31277 338 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-210ENST00000527699 FKBP5Q13451 457 aaPredicted RBP12.66□□□□□ -0.38
CAPN1-210ENST00000527699 ARHGEF6Q15052 776 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 WWC1Q8IX03 1113 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 OGFOD1Q8N543 542 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 MPHOSPH8Q99549 860 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 MED23Q9ULK4 1368 aa12.66□□□□□ -0.38
CAPN1-210ENST00000527699 ZNF804BA4D1E1 1349 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 MANSC4A6NHS7 340 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-210ENST00000527699 F6X3S4 739 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 ECM2O94769 699 aaPredicted RBP12.65□□□□□ -0.38
CAPN1-210ENST00000527699 PTPN12Q05209 780 aaKnown RBP12.65□□□□□ -0.38
CAPN1-210ENST00000527699 CHRNDQ07001 517 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 FLIIQ13045 1269 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 GCKRQ14397 625 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 SPRYD7Q5W111 196 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
CAPN1-210ENST00000527699 CRHR2Q13324 411 aa12.64□□□□□ -0.39
CAPN1-210ENST00000527699 STRIP1Q5VSL9 837 aa12.64□□□□□ -0.39
CAPN1-210ENST00000527699 ARMC9Q7Z3E5 817 aa12.64□□□□□ -0.39
CAPN1-210ENST00000527699 SHISA4Q96DD7 197 aa12.64□□□□□ -0.39
CAPN1-210ENST00000527699 ZNF594Q96JF6 807 aaPredicted RBP12.64□□□□□ -0.39
CAPN1-210ENST00000527699 ANGEL1Q9UNK9 670 aaKnown RBP12.64□□□□□ -0.39
CAPN1-210ENST00000527699 SPTBN5Q9NRC6 3674 aaKnown RBP12.63□□□□□ -0.39
CAPN1-210ENST00000527699 CLRN2A0PK11 232 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 IGF2BP3O00425 579 aaKnown RBP eCLIP12.63□□□□□ -0.39
CAPN1-210ENST00000527699 CASP7P55210 303 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 INHBEP58166 350 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 CAP1Q01518 475 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 EXOSC9Q06265 439 aaKnown RBP12.63□□□□□ -0.39
CAPN1-210ENST00000527699 OTUD7BQ6GQQ9 843 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 SYMPKQ92797 1274 aaKnown RBP12.63□□□□□ -0.39
CAPN1-210ENST00000527699 LEMD3Q9Y2U8 911 aa12.63□□□□□ -0.39
CAPN1-210ENST00000527699 IRS2Q9Y4H2 1338 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 PSME4Q14997 1843 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 ANKRD18BA2A2Z9 1011 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 BCAMP50895 628 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 CERS5Q8N5B7 392 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 NKX2-3Q8TAU0 364 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 ANKRD2Q9GZV1 360 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 CD209Q9NNX6 404 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 AOX1Q06278 1338 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 FANCIQ9NVI1 1328 aa12.62□□□□□ -0.39
CAPN1-210ENST00000527699 RBM5P52756 815 aaKnown RBP eCLIP12.61□□□□□ -0.39
CAPN1-210ENST00000527699 DLGAP5Q15398 846 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 EPHA10Q5JZY3 1008 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 CLMNQ96JQ2 1002 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 FAM161BQ96MY7 647 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 CHMP4AQ9BY43 222 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 MYH16Q9H6N6 1097 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 VEZTQ9HBM0 779 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 MRS2Q9HD23 443 aa12.61□□□□□ -0.39
CAPN1-210ENST00000527699 MYH3P11055 1940 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 VAMP4O75379 141 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 FARP2O94887 1054 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-210ENST00000527699 CSF1RP07333 972 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 FOXO4P98177 505 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 MTFR1Q15390 333 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 LMBR1LQ6UX01 489 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 SLC10A4Q96EP9 437 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 PLA2G12BQ9BX93 195 aa12.6□□□□□ -0.39
CAPN1-210ENST00000527699 SPINK5Q9NQ38 1064 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-210ENST00000527699 ZNF646O15015 1829 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms