RNA–Protein interactions for RNA: ENST00000527683.1

LINC01001-202, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 1 (best)

Gene LINC01001, Length 683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-202ENST00000527683 LTN1O94822 1766 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 PXDNLA1KZ92 1463 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 CTSOP43234 321 aaPredicted RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 CRKLP46109 303 aaKnown RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 RELBQ01201 579 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 DHX9Q08211 1270 aaKnown RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 DDR1Q08345 913 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 VAC14Q08AM6 782 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 FSTL1Q12841 308 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 AMOTQ4VCS5 1084 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 DALRD3Q5D0E6 543 aaKnown RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 COL13A1Q5TAT6 717 aaPredicted RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 PHTF2Q8N3S3 785 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 JMYQ8N9B5 988 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 KLRG1Q96E93 195 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 CCDC85AQ96PX6 553 aaPredicted RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 TSEN34Q9BSV6 310 aaKnown RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 ZNF395Q9H8N7 513 aaPredicted RBP7.64□□□□□ -1.19
LINC01001-202ENST00000527683 CEP126Q9P2H0 1117 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 COG6Q9Y2V7 657 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 QSER1Q2KHR3 1735 aa7.64□□□□□ -1.19
LINC01001-202ENST00000527683 KDRP35968 1356 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 ERBB4Q15303 1308 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 WFS1O76024 890 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 NEFLP07196 543 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 PPP2R1AP30153 589 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 CHRNA5P30532 468 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 CNGB1Q14028 1251 aaPredicted RBP7.63□□□□□ -1.19
LINC01001-202ENST00000527683 ZNF530Q6P9A1 599 aaPredicted RBP7.63□□□□□ -1.19
LINC01001-202ENST00000527683 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
LINC01001-202ENST00000527683 INSM2Q96T92 566 aaPredicted RBP7.63□□□□□ -1.19
LINC01001-202ENST00000527683 NXF1Q9UBU9 619 aaKnown RBP7.63□□□□□ -1.19
LINC01001-202ENST00000527683 GOLGB1Q14789 3259 aaKnown RBP7.62□□□□□ -1.19
LINC01001-202ENST00000527683 FIGNL2A6NMB9 653 aa7.62□□□□□ -1.19
LINC01001-202ENST00000527683 POLRMTO00411 1230 aaKnown RBP7.62□□□□□ -1.19
LINC01001-202ENST00000527683 ADH1AP07327 375 aa7.62□□□□□ -1.19
LINC01001-202ENST00000527683 ABL2P42684 1182 aa7.62□□□□□ -1.19
LINC01001-202ENST00000527683 C16orf71Q8IYS4 520 aaPredicted RBP7.62□□□□□ -1.19
LINC01001-202ENST00000527683 RNF181Q9P0P0 153 aa7.62□□□□□ -1.19
LINC01001-202ENST00000527683 C10orf71Q711Q0 1435 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 C4BP0C0L5 1744 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 DOT1LQ8TEK3 1739 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 USP42Q9H9J4 1324 aaKnown RBP7.61□□□□□ -1.19
LINC01001-202ENST00000527683 IL13P35225 146 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 PRELPP51888 382 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 NFIXQ14938 502 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 FOXD4L5Q5VV16 416 aaPredicted RBP7.61□□□□□ -1.19
LINC01001-202ENST00000527683 SULT6B1Q6IMI4 303 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 DNAJC10Q8IXB1 793 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 LGR6Q9HBX8 967 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 TUBGCP6Q96RT7 1819 aa7.61□□□□□ -1.19
LINC01001-202ENST00000527683 KDM2BQ8NHM5 1336 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 TTLL8A6PVC2 850 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 H3BM21 787 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 CYP19A1P11511 503 aaPredicted RBP7.6□□□□□ -1.19
LINC01001-202ENST00000527683 PTGIRP43119 386 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 WDR43Q15061 677 aaKnown RBP eCLIP7.6□□□□□ -1.19
LINC01001-202ENST00000527683 C1orf141Q5JVX7 400 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 USPL1Q5W0Q7 1092 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 OSBPL3Q9H4L5 887 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 RGPD2P0DJD1 1756 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 CEP350Q5VT06 3117 aa7.6□□□□□ -1.19
LINC01001-202ENST00000527683 KDM6AO15550 1401 aaPredicted RBP7.6□□□□□ -1.19
LINC01001-202ENST00000527683 PLEKHG2Q9H7P9 1386 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 GLTPD2A6NH11 291 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 TRAK2O60296 914 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 MAN1A2O60476 641 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 VEGFAP15692 232 aaPredicted RBP7.59□□□□□ -1.19
LINC01001-202ENST00000527683 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
LINC01001-202ENST00000527683 SLC39A6Q13433 755 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 TMEM132AQ24JP5 1023 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 MORC1Q86VD1 984 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 NGEFQ8N5V2 710 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 SMC1BQ8NDV3 1235 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 NARFQ9UHQ1 456 aa7.59□□□□□ -1.19
LINC01001-202ENST00000527683 SOS1Q07889 1333 aaPredicted RBP7.58□□□□□ -1.2
LINC01001-202ENST00000527683 MAP2P11137 1827 aaKnown RBP7.58□□□□□ -1.2
LINC01001-202ENST00000527683 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
LINC01001-202ENST00000527683 SERPINB2P05120 415 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 LMNB1P20700 586 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 AKAP4Q5JQC9 854 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 TTLL6Q8N841 843 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 RNF217Q8TC41 542 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 SLC52A2Q9HAB3 445 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 NUDCQ9Y266 331 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 SUPT16HQ9Y5B9 1047 aaKnown RBP7.58□□□□□ -1.2
LINC01001-202ENST00000527683 PCDHB11Q9Y5F2 797 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 TOGARAM1Q9Y4F4 1720 aa7.58□□□□□ -1.2
LINC01001-202ENST00000527683 C5P01031 1676 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 CICQ96RK0 1608 aaPredicted RBP7.57□□□□□ -1.2
LINC01001-202ENST00000527683 RNMTO43148 476 aaKnown RBP7.57□□□□□ -1.2
LINC01001-202ENST00000527683 PPFIA3O75145 1194 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 UPP2O95045 317 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 RASSF7Q02833 373 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 ERICH6BQ5W0A0 696 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 C2CD5Q86YS7 1000 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 CFAP53Q96M91 514 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 ZBTB1Q9Y2K1 713 aa7.57□□□□□ -1.2
LINC01001-202ENST00000527683 POM121CA8CG34 1229 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms