RNA–Protein interactions for RNA: ENST00000527586.1

VPS26B-204, Transcript of VPS26, retromer complex component B, humanhuman

TSL 3

Gene VPS26B, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-204ENST00000527586 TESK2Q96S53 571 aa9.51□□□□□ -0.89
VPS26B-204ENST00000527586 ZC3H12CQ9C0D7 883 aaKnown RBP9.51□□□□□ -0.89
VPS26B-204ENST00000527586 CPA4Q9UI42 421 aa9.51□□□□□ -0.89
VPS26B-204ENST00000527586 CHD8Q9HCK8 2581 aa9.51□□□□□ -0.89
VPS26B-204ENST00000527586 SHHQ15465 462 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 MTHFSDQ2M296 383 aaKnown RBP9.5□□□□□ -0.89
VPS26B-204ENST00000527586 SLC10A5Q5PT55 438 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 C17orf99Q6UX52 265 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 TMC4Q7Z404 712 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 NGEFQ8N5V2 710 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 DEFB129Q9H1M3 183 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 GABRQQ9UN88 632 aa9.5□□□□□ -0.89
VPS26B-204ENST00000527586 ERVV-1B6SEH8 477 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 USP2O75604 605 aaPredicted RBP9.49□□□□□ -0.89
VPS26B-204ENST00000527586 PDE3AQ14432 1141 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 PPP1R42Q7Z4L9 355 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 OGFOD1Q8N543 542 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 TBC1D16Q8TBP0 767 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 LAMB1P07942 1786 aa9.49□□□□□ -0.89
VPS26B-204ENST00000527586 CCDC85BQ15834 202 aaPredicted RBP9.48□□□□□ -0.89
VPS26B-204ENST00000527586 C9orf50Q5SZB4 431 aa9.48□□□□□ -0.89
VPS26B-204ENST00000527586 ZNF34Q8IZ26 560 aa9.48□□□□□ -0.89
VPS26B-204ENST00000527586 ZBTB38Q8NAP3 1195 aaPredicted RBP9.48□□□□□ -0.89
VPS26B-204ENST00000527586 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.48□□□□□ -0.89
VPS26B-204ENST00000527586 MAP3K15Q6ZN16 1313 aa9.48□□□□□ -0.89
VPS26B-204ENST00000527586 SCN9AQ15858 1988 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 USP17L3A6NCW0 530 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 USP17L4A6NCW7 530 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 BTBD19C9JJ37 291 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 SNRPA1P09661 255 aaKnown RBP9.47□□□□□ -0.89
VPS26B-204ENST00000527586 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
VPS26B-204ENST00000527586 FCGRTP55899 365 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 SUPT20HL1Q3ZLR7 823 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 AKNAD1Q5T1N1 836 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 USP17L1Q7RTZ2 530 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 KHSRPQ92945 711 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS26B-204ENST00000527586 UTP14AQ9BVJ6 771 aaKnown RBP9.47□□□□□ -0.89
VPS26B-204ENST00000527586 ZCCHC17Q9NP64 241 aaKnown RBP9.47□□□□□ -0.89
VPS26B-204ENST00000527586 PFASO15067 1338 aa9.47□□□□□ -0.89
VPS26B-204ENST00000527586 LRRC26Q2I0M4 334 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 NBPF12Q5TAG4 269 aaPredicted RBP9.46□□□□□ -0.9
VPS26B-204ENST00000527586 IL17REQ8NFR9 667 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 PXYLP1Q8TE99 480 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 UIMC1Q96RL1 719 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 GAS2L1Q99501 681 aaPredicted RBP9.46□□□□□ -0.9
VPS26B-204ENST00000527586 MXD3Q9BW11 206 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 ZBTB3Q9H5J0 574 aa9.46□□□□□ -0.9
VPS26B-204ENST00000527586 BTBD11A6QL63 1104 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 PRR33A8MZF0 331 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 CETPP11597 493 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 FLT3LGP49771 235 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 TTLL7Q6ZT98 887 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 PHOX2BQ99453 314 aa9.45□□□□□ -0.9
VPS26B-204ENST00000527586 CXXC1Q9P0U4 656 aaPredicted RBP9.45□□□□□ -0.9
VPS26B-204ENST00000527586 COL1A1P02452 1464 aaPredicted RBP9.45□□□□□ -0.9
VPS26B-204ENST00000527586 KCNQ1P51787 676 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 TFF2Q03403 129 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 PARP10Q53GL7 1025 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 ZNF576Q9H609 170 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 TAOK2Q9UL54 1235 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 PPP2R3BQ9Y5P8 575 aa9.44□□□□□ -0.9
VPS26B-204ENST00000527586 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
VPS26B-204ENST00000527586 TCF20Q9UGU0 1960 aaKnown RBP9.44□□□□□ -0.9
VPS26B-204ENST00000527586 CFAP54Q96N23 3096 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-204ENST00000527586 PI4K2BG5E9Z4 385 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 UFL1O94874 794 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 HMOX1P09601 288 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 IL13P35225 146 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 CELF1Q92879 486 aaKnown RBP9.43□□□□□ -0.9
VPS26B-204ENST00000527586 KCNH6Q9H252 994 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 TSPYL2Q9H2G4 693 aaPredicted RBP9.43□□□□□ -0.9
VPS26B-204ENST00000527586 SPTBN4Q9H254 2564 aa9.43□□□□□ -0.9
VPS26B-204ENST00000527586 EPG5Q9HCE0 2579 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 COL6A1P12109 1028 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 IRF5Q13568 498 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 VGLL4Q14135 290 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 AAK1Q2M2I8 961 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.42□□□□□ -0.9
VPS26B-204ENST00000527586 MTMR14Q8NCE2 650 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 FBXW7Q969H0 707 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 ZBED3Q96IU2 234 aaPredicted RBP9.42□□□□□ -0.9
VPS26B-204ENST00000527586 PRKAG2Q9UGJ0 569 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 OGDHLQ9ULD0 1010 aa9.42□□□□□ -0.9
VPS26B-204ENST00000527586 U2AF1L5P0DN76 240 aaPredicted RBP9.41□□□□□ -0.9
VPS26B-204ENST00000527586 DNAJB2P25686 324 aa9.41□□□□□ -0.9
VPS26B-204ENST00000527586 ITGB8P26012 769 aa9.41□□□□□ -0.9
VPS26B-204ENST00000527586 U2AF1Q01081 240 aaKnown RBP eCLIP9.41□□□□□ -0.9
VPS26B-204ENST00000527586 DACT2Q5SW24 774 aa9.41□□□□□ -0.9
VPS26B-204ENST00000527586 GIGYF2Q6Y7W6 1299 aaKnown RBP9.41□□□□□ -0.9
VPS26B-204ENST00000527586 ERMP1Q7Z2K6 904 aa9.41□□□□□ -0.9
VPS26B-204ENST00000527586 PRDM12Q9H4Q4 367 aa9.41□□□□□ -0.9
VPS26B-204ENST00000527586 LRRC37AA6NMS7 1700 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 DDX60LQ5H9U9 1706 aaKnown RBP9.4□□□□□ -0.9
VPS26B-204ENST00000527586 ZNF804BA4D1E1 1349 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 RGS20O76081 388 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 IGFBP4P22692 258 aa9.4□□□□□ -0.9
VPS26B-204ENST00000527586 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms