RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 VPS37DQ86XT2 251 aa19.27■□□□□ 0.68
SNRNP35-204ENST00000527158 ZNF532Q9HCE3 1301 aa19.27■□□□□ 0.68
SNRNP35-204ENST00000527158 ST5P78524 1137 aa19.27■□□□□ 0.68
SNRNP35-204ENST00000527158 PRR5LQ6MZQ0 368 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 TFCP2L1Q9NZI6 479 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 ZNF804BA4D1E1 1349 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 SERPINB2P05120 415 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 GYG1P46976 350 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 CLEC17AQ6ZS10 378 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 WWC3Q9ULE0 1092 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 CASZ1Q86V15 1759 aa19.26■□□□□ 0.67
SNRNP35-204ENST00000527158 PKP1Q13835 747 aa19.25■□□□□ 0.67
SNRNP35-204ENST00000527158 IMMTQ16891 758 aaKnown RBP19.25■□□□□ 0.67
SNRNP35-204ENST00000527158 GOLGA6L22H0YM25 854 aa19.25■□□□□ 0.67
SNRNP35-204ENST00000527158 TCEANC2Q96MN5 208 aa19.25■□□□□ 0.67
SNRNP35-204ENST00000527158 TAF1P21675 1872 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 TCRBV5S4A2TA0A5A2 114 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 FGAP02671 866 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 GRAPQ13588 217 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 MAGEB6Q8N7X4 407 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 GRAPLQ8TC17 118 aaPredicted RBP19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 RPGRQ92834 1020 aaKnown RBP19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 AIDAQ96BJ3 306 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 LRP2BPQ9P2M1 347 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 TPCN1Q9ULQ1 816 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 MYH7P12883 1935 aa19.24■□□□□ 0.67
SNRNP35-204ENST00000527158 XRCC6P12956 609 aaKnown RBP eCLIP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 ME3Q16798 604 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 SMC3Q9UQE7 1217 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 E7EWF7 191 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 LARGE1O95461 756 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 FGD1P98174 961 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 COL9A3Q14050 684 aaPredicted RBP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 TOB2Q14106 344 aaPredicted RBP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 STOX1Q6ZVD7 989 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 DHX32Q7L7V1 743 aaKnown RBP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 CCDC83Q8IWF9 413 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 FAM84BQ96KN1 310 aaPredicted RBP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 DENND2AQ9ULE3 1009 aa19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 IQSEC3Q9UPP2 1182 aaPredicted RBP19.23■□□□□ 0.67
SNRNP35-204ENST00000527158 WTIPA6NIX2 430 aaPredicted RBP19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 FOXP2O15409 715 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 BAG4O95429 457 aaKnown RBP19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 TTLL5Q6EMB2 1281 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 EP400Q96L91 3159 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 SEMA3EO15041 775 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 APPP05067 770 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 ZDHHC9Q9Y397 364 aa19.22■□□□□ 0.67
SNRNP35-204ENST00000527158 ZNF213O14771 459 aa19.21■□□□□ 0.67
SNRNP35-204ENST00000527158 Q6ZUG5 572 aa19.21■□□□□ 0.67
SNRNP35-204ENST00000527158 FBXO33Q7Z6M2 555 aa19.21■□□□□ 0.67
SNRNP35-204ENST00000527158 TNRC6CQ9HCJ0 1690 aaKnown RBP19.21■□□□□ 0.67
SNRNP35-204ENST00000527158 BRD1O95696 1058 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 FLAD1Q8NFF5 587 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 STRBPQ96SI9 672 aaKnown RBP19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 A0A1B0GUL6 1792 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 A0A0G2JLW4 131 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 POLRMTO00411 1230 aaKnown RBP19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 HIBADHP31937 336 aaKnown RBP19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 ZNF827Q17R98 1081 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 CRY2Q49AN0 593 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 NLGN1Q8N2Q7 840 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 RBM17Q96I25 401 aaKnown RBP19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 ANKIB1Q9P2G1 1089 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 ABCF2Q9UG63 623 aa19.2■□□□□ 0.66
SNRNP35-204ENST00000527158 DDR1Q08345 913 aa19.19■□□□□ 0.66
SNRNP35-204ENST00000527158 NECAB1Q8N987 351 aa19.19■□□□□ 0.66
SNRNP35-204ENST00000527158 WDR33Q9C0J8 1336 aaKnown RBP19.19■□□□□ 0.66
SNRNP35-204ENST00000527158 HAND2P61296 217 aa19.19■□□□□ 0.66
SNRNP35-204ENST00000527158 LEMD3Q9Y2U8 911 aa19.19■□□□□ 0.66
SNRNP35-204ENST00000527158 PATL2C9JE40 543 aaKnown RBP19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 MBD4O95243 580 aa19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 GNAT2P19087 354 aa19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 EXOSC10Q01780 885 aaKnown RBP19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 GZF1Q9H116 711 aaPredicted RBP19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 RAI14Q9P0K7 980 aa19.18■□□□□ 0.66
SNRNP35-204ENST00000527158 KLRK1P26718 216 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 COL23A1Q86Y22 540 aaPredicted RBP19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 GRPEL1Q9HAV7 217 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 DOCK2Q92608 1830 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 GJB2P29033 226 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 FOXD4L5Q5VV16 416 aaPredicted RBP19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 FOXD4L4Q8WXT5 416 aaPredicted RBP19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 BRF1Q92994 677 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 XDHP47989 1333 aa19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 PDS5AQ29RF7 1337 aaKnown RBP19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 MYO5AQ9Y4I1 1855 aaKnown RBP19.17■□□□□ 0.66
SNRNP35-204ENST00000527158 CYP7A1P22680 504 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 ALX1Q15699 326 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 MCTP1Q6DN14 999 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 NCOA7Q8NI08 942 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 LRRC2Q9BYS8 371 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 BBOX1O75936 387 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 ST3GAL1Q11201 340 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 RALYLQ86SE5 291 aaKnown RBP19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 NACAP1Q9BZK3 213 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 ARMT1Q9H993 441 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 PNPLA7Q6ZV29 1317 aa19.16■□□□□ 0.66
SNRNP35-204ENST00000527158 PDIA4P13667 645 aaKnown RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms