RNA–Protein interactions for RNA: ENST00000527125.1

SCN3B-203, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 3

Gene SCN3B, Length 3,289 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-203ENST00000527125 DHX37Q8IY37 1157 aaKnown RBP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 ELOA2Q8IYF1 753 aaPredicted RBP10.83□□□□□ -0.68
SCN3B-203ENST00000527125 TIGD1Q96MW7 591 aa10.83□□□□□ -0.68
SCN3B-203ENST00000527125 A0A0G2JLW4 131 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 GOLGA6L19H0YKK7 550 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 SOX12O15370 315 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 YEATS4O95619 227 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 ZMYM1Q5SVZ6 1142 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 CEP57L1Q8IYX8 460 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 MRPS27Q92552 414 aaKnown RBP10.82□□□□□ -0.68
SCN3B-203ENST00000527125 HELLSQ9NRZ9 838 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 ATG3Q9NT62 314 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 INTS13Q9NVM9 706 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 HPS5Q9UPZ3 1129 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 MAP3K15Q6ZN16 1313 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 MROH7-TTC4A0A0A0MT08 1334 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 CCDC66A2RUB6 948 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 GOLGA6L4A6NEF3 574 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 KIFC2Q96AC6 838 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 VWA3AA6NCI4 1184 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 FAM69CQ0P6D2 419 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 G3BP1Q13283 466 aaKnown RBP eCLIP10.82□□□□□ -0.68
SCN3B-203ENST00000527125 AMOTQ4VCS5 1084 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 CCDC129Q6ZRS4 1044 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 KBTBD3Q8NAB2 608 aa10.82□□□□□ -0.68
SCN3B-203ENST00000527125 TRMT1Q9NXH9 659 aaKnown RBP10.82□□□□□ -0.68
SCN3B-203ENST00000527125 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
SCN3B-203ENST00000527125 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
SCN3B-203ENST00000527125 MAP3K9P80192 1104 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 IQUBQ8NA54 791 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 KLHDC4Q8TBB5 520 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 ZNF396Q96N95 335 aaPredicted RBP10.81□□□□□ -0.68
SCN3B-203ENST00000527125 METTL22Q9BUU2 404 aaPredicted RBP10.81□□□□□ -0.68
SCN3B-203ENST00000527125 GPR108Q9NPR9 543 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 DLEC1Q9Y238 1755 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.81□□□□□ -0.68
SCN3B-203ENST00000527125 EFCAB8A8MWE9 144 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 MYO1BO43795 1136 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 OS9Q13438 667 aaPredicted RBP10.81□□□□□ -0.68
SCN3B-203ENST00000527125 CCDC158Q5M9N0 1113 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 FSIP1Q8NA03 581 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 NGDNQ8NEJ9 315 aaKnown RBP10.81□□□□□ -0.68
SCN3B-203ENST00000527125 PSD3Q9NYI0 1048 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 MYH13Q9UKX3 1938 aa10.81□□□□□ -0.68
SCN3B-203ENST00000527125 WDR19Q8NEZ3 1342 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 SYT10Q6XYQ8 523 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 ATG9AQ7Z3C6 839 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 SRRTQ9BXP5 876 aaKnown RBP10.8□□□□□ -0.68
SCN3B-203ENST00000527125 CLIC4Q9Y696 253 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 E7EWF7 191 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 MAP2K7O14733 419 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 MDM2Q00987 491 aaPredicted RBP10.8□□□□□ -0.68
SCN3B-203ENST00000527125 APOBRQ0VD83 1088 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.8□□□□□ -0.68
SCN3B-203ENST00000527125 CALCOCO1Q9P1Z2 691 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 DNAI1Q9UI46 699 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 CMA1P23946 247 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 HNRNPH2P55795 449 aaKnown RBP10.8□□□□□ -0.68
SCN3B-203ENST00000527125 PTPAQ15257 358 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 FILIP1Q7Z7B0 1213 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 VSTM4Q8IW00 320 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 DPF2Q92785 391 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
SCN3B-203ENST00000527125 IFNKQ9P0W0 207 aa10.8□□□□□ -0.68
SCN3B-203ENST00000527125 KIF28PB7ZC32 967 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
SCN3B-203ENST00000527125 TFCP2Q12800 502 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 MAP3K14Q99558 947 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 NOL10Q9BSC4 688 aaKnown RBP10.79□□□□□ -0.68
SCN3B-203ENST00000527125 ATRNO75882 1429 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 NID2Q14112 1375 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 WDHD1O75717 1129 aaPredicted RBP10.79□□□□□ -0.68
SCN3B-203ENST00000527125 FOXO4P98177 505 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 MPRIPQ6WCQ1 1025 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 ZNF592Q92610 1267 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 ERCC4Q92889 916 aaPredicted RBP10.79□□□□□ -0.68
SCN3B-203ENST00000527125 SLC26A8Q96RN1 970 aa10.79□□□□□ -0.68
SCN3B-203ENST00000527125 CC2D1AQ6P1N0 951 aaPredicted RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 CCDC73Q6ZRK6 1079 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 ARHGEF25Q86VW2 580 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 FUT8Q9BYC5 575 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 MRFAP1Q9Y605 127 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 A0A1B0GVL5 298 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 H3BQV1 296 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 HSPD1P10809 573 aaKnown RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 BMP6P22004 513 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 KCNJ4P48050 445 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 FANCCQ00597 558 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 NT5DC1Q5TFE4 455 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 MB21D2Q8IYB1 491 aaPredicted RBP10.78□□□□□ -0.68
SCN3B-203ENST00000527125 FBXO18Q8NFZ0 1043 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 KCNG4Q8TDN1 519 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 DBNDD2Q9BQY9 259 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 LRP5O75197 1615 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 CPDO75976 1380 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 ANKRD36CQ5JPF3 1778 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 ZNF18P17022 549 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 FECHP22830 423 aa10.78□□□□□ -0.68
SCN3B-203ENST00000527125 TMEM132AQ24JP5 1023 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms