RNA–Protein interactions for RNA: ENST00000527004.5

FOXRED1-207, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

TSL 5

Gene FOXRED1, Length 1,760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-207ENST00000527004 SRP68Q9UHB9 627 aaKnown RBP18.79■□□□□ 0.6
FOXRED1-207ENST00000527004 TCRBV5S4A2TA0A5A2 114 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 MBD3O95983 291 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 FGD1P98174 961 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 C3orf67Q6ZVT6 689 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 QTRT2Q9H974 415 aaKnown RBP18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 RGS17Q9UGC6 210 aaPredicted RBP18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 ZNF532Q9HCE3 1301 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 LLPHQ9BRT6 129 aaKnown RBP18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 MTMR6Q9Y217 621 aa18.78■□□□□ 0.6
FOXRED1-207ENST00000527004 ZNF804BA4D1E1 1349 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 HMGB2P26583 209 aaKnown RBP18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 RFC4P35249 363 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 LARP1BQ659C4 914 aaKnown RBP18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 TTLL5Q6EMB2 1281 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 TMEM87AQ8NBN3 555 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 BRF1Q92994 677 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 GNL3LQ9NVN8 582 aaKnown RBP18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 MINPP1Q9UNW1 487 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 COL24A1Q17RW2 1714 aa18.77■□□□□ 0.6
FOXRED1-207ENST00000527004 SNAP23O00161 211 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 ZNF213O14771 459 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 PFKFB2O60825 505 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 BCAMP50895 628 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 EVCP57679 992 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 FAM196AQ6ZSG2 479 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 WWC3Q9ULE0 1092 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 ZMYM6O95789 1325 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 WDR19Q8NEZ3 1342 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 MRE11P49959 708 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 ALX1Q15699 326 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 SMIM5Q71RC9 77 aa18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 ZNF274Q96GC6 653 aaPredicted RBP18.76■□□□□ 0.59
FOXRED1-207ENST00000527004 C4BP0C0L5 1744 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 SBF2Q86WG5 1849 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 SLC27A3Q5K4L6 730 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 NCOA7Q8NI08 942 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 GPT2Q8TD30 523 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 AIDAQ96BJ3 306 aa18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 STRBPQ96SI9 672 aaKnown RBP18.75■□□□□ 0.59
FOXRED1-207ENST00000527004 A0A0G2JLW4 131 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 CAVIN4Q5BKX8 364 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 AMIGO3Q86WK7 504 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 ANKRD2Q9GZV1 360 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 TAF1LQ8IZX4 1826 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 MYH7P12883 1935 aa18.74■□□□□ 0.59
FOXRED1-207ENST00000527004 ZBTB22O15209 634 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 NCLP19338 710 aaKnown RBP18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 MCM5P33992 734 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 ZNF445P59923 1031 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 STK3Q13188 491 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 CSPP1Q1MSJ5 1256 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 MAGEB6Q8N7X4 407 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 CHAMP1Q96JM3 812 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 CARMIL3Q8ND23 1372 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 PATL2C9JE40 543 aaKnown RBP18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 SEMA3EO15041 775 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 GNAT2P19087 354 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 MB21D2Q8IYB1 491 aaPredicted RBP18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 SMARCC2Q8TAQ2 1214 aa18.73■□□□□ 0.59
FOXRED1-207ENST00000527004 SCRN1Q12765 414 aa18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 CAVIN1Q6NZI2 390 aaKnown RBP18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 LRRC2Q9BYS8 371 aa18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 LRRC4BQ9NT99 713 aa18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 PNPLA7Q6ZV29 1317 aa18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 COL4A1P02462 1669 aa18.72■□□□□ 0.59
FOXRED1-207ENST00000527004 TM4SF1P30408 202 aa18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 HAND2P61296 217 aa18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 HMGN5P82970 282 aaKnown RBP18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 TRDNQ13061 729 aa18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 RALYLQ86SE5 291 aaKnown RBP18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 USP48Q86UV5 1035 aa18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
FOXRED1-207ENST00000527004 VPS37CA5D8V6 355 aaPredicted RBP18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 APPP05067 770 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 APOBRQ0VD83 1088 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 KRT27Q7Z3Y8 459 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 GRPEL1Q9HAV7 217 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 LRP2BPQ9P2M1 347 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 KIF3AQ9Y496 699 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 DOCK2Q92608 1830 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 PHF14O94880 888 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 PDIA3P30101 505 aaKnown RBP18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 NFIXQ14938 502 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 ZSCAN23Q3MJ62 389 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 FBXO33Q7Z6M2 555 aa18.7■□□□□ 0.58
FOXRED1-207ENST00000527004 GYG1P46976 350 aa18.69■□□□□ 0.58
FOXRED1-207ENST00000527004 POTEAQ6S8J7 498 aa18.69■□□□□ 0.58
FOXRED1-207ENST00000527004 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
FOXRED1-207ENST00000527004 SYAP1Q96A49 352 aaPredicted RBP18.69■□□□□ 0.58
FOXRED1-207ENST00000527004 FAM84BQ96KN1 310 aaPredicted RBP18.69■□□□□ 0.58
FOXRED1-207ENST00000527004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.68■□□□□ 0.58
FOXRED1-207ENST00000527004 PRC1O43663 620 aa18.68■□□□□ 0.58
FOXRED1-207ENST00000527004 MBD4O95243 580 aa18.68■□□□□ 0.58
FOXRED1-207ENST00000527004 TMED8Q6PL24 325 aaPredicted RBP18.68■□□□□ 0.58
FOXRED1-207ENST00000527004 GAS2L3Q86XJ1 694 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms