RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 HGSNATQ68CP4 663 aa7□□□□□ -1.29
CTR9-203ENST00000526874 TCF12Q99081 682 aa7□□□□□ -1.29
CTR9-203ENST00000526874 MUC3BQ9H195 1237 aa7□□□□□ -1.29
CTR9-203ENST00000526874 GSK3AP49840 483 aa6.99□□□□□ -1.29
CTR9-203ENST00000526874 ATP2B2Q01814 1243 aa6.99□□□□□ -1.29
CTR9-203ENST00000526874 GRIK4Q16099 956 aa6.99□□□□□ -1.29
CTR9-203ENST00000526874 EAPPQ56P03 285 aaPredicted RBP6.99□□□□□ -1.29
CTR9-203ENST00000526874 KIAA0319Q5VV43 1072 aa6.99□□□□□ -1.29
CTR9-203ENST00000526874 NLRP2Q9NX02 1062 aa6.99□□□□□ -1.29
CTR9-203ENST00000526874 RNF225M0QZC1 329 aaPredicted RBP6.98□□□□□ -1.29
CTR9-203ENST00000526874 DEAF1O75398 565 aaPredicted RBP6.98□□□□□ -1.29
CTR9-203ENST00000526874 VAMP1P23763 118 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 NXPE4Q6UWF7 544 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 SHISA2Q6UWI4 295 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 CCNJLQ8IV13 435 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 SLC7A3Q8WY07 619 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 FAM161BQ96MY7 647 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 BCO2Q9BYV7 579 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 BHLHE41Q9C0J9 482 aaPredicted RBP6.98□□□□□ -1.29
CTR9-203ENST00000526874 NOP53Q9NZM5 478 aaKnown RBP6.98□□□□□ -1.29
CTR9-203ENST00000526874 SOX13Q9UN79 622 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 PPME1Q9Y570 386 aa6.98□□□□□ -1.29
CTR9-203ENST00000526874 A0A096LPE4 126 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 A0A1W2PPZ6 126 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 FCGRTP55899 365 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 RASSF7Q02833 373 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 TRIM28Q13263 835 aaKnown RBP6.97□□□□□ -1.29
CTR9-203ENST00000526874 FBXO33Q7Z6M2 555 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 FMR1NBQ8N0W7 255 aaPredicted RBP6.97□□□□□ -1.29
CTR9-203ENST00000526874 GLIS3Q8NEA6 775 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 DUSP9Q99956 384 aaKnown RBP6.97□□□□□ -1.29
CTR9-203ENST00000526874 ADAM19Q9H013 955 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 ABCB6Q9NP58 842 aa6.97□□□□□ -1.29
CTR9-203ENST00000526874 FAM177BA6PVY3 158 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 PIK3R2O00459 728 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 ZNF157P51786 506 aaPredicted RBP6.96□□□□□ -1.3
CTR9-203ENST00000526874 KCNMA1Q12791 1236 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 SETDB1Q15047 1291 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 SF3A1Q15459 793 aaKnown RBP6.96□□□□□ -1.3
CTR9-203ENST00000526874 PRRT3Q5FWE3 981 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 ILDR2Q71H61 639 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 DPH6Q7L8W6 267 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 VN1R5Q7Z5H4 357 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 GALNT11Q8NCW6 608 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 BSNDQ8WZ55 320 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 DCAF5Q96JK2 942 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 OSBPL7Q9BZF2 842 aa6.96□□□□□ -1.3
CTR9-203ENST00000526874 KRBA1A5PL33 1030 aa6.95□□□□□ -1.3
CTR9-203ENST00000526874 H3BRJ5 948 aa6.95□□□□□ -1.3
CTR9-203ENST00000526874 DDX3YO15523 660 aaKnown RBP6.95□□□□□ -1.3
CTR9-203ENST00000526874 MARCH6O60337 910 aa6.95□□□□□ -1.3
CTR9-203ENST00000526874 RAC1P63000 192 aa6.95□□□□□ -1.3
CTR9-203ENST00000526874 ALG1LQ6GMV1 187 aa6.95□□□□□ -1.3
CTR9-203ENST00000526874 SPDYE3A6NKU9 549 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 SOX1O00570 391 aaPredicted RBP6.94□□□□□ -1.3
CTR9-203ENST00000526874 FSCN2O14926 492 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 PRPF40AO75400 957 aaKnown RBP6.94□□□□□ -1.3
CTR9-203ENST00000526874 GDF11O95390 407 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 CHRNA4P43681 627 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 CABP4P57796 275 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 FOXD4L6Q3SYB3 417 aaPredicted RBP6.94□□□□□ -1.3
CTR9-203ENST00000526874 FOXD4L3Q6VB84 417 aaPredicted RBP6.94□□□□□ -1.3
CTR9-203ENST00000526874 NOL8Q76FK4 1167 aaKnown RBP6.94□□□□□ -1.3
CTR9-203ENST00000526874 FBF1Q8TES7 1133 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 KLHDC7BQ96G42 594 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 KCNK4Q9NYG8 393 aa6.94□□□□□ -1.3
CTR9-203ENST00000526874 TMEM238LA0A1B0GVL6 79 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 SPATA31C1P0DKV0 1188 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 NLRP12P59046 1061 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 IKBKEQ14164 716 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 ZNF326Q5BKZ1 582 aaKnown RBP6.93□□□□□ -1.3
CTR9-203ENST00000526874 PRPF40BQ6NWY9 871 aaKnown RBP6.93□□□□□ -1.3
CTR9-203ENST00000526874 TMED8Q6PL24 325 aaPredicted RBP6.93□□□□□ -1.3
CTR9-203ENST00000526874 DTHD1Q6ZMT9 781 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 ZNF576Q9H609 170 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 PARP2Q9UGN5 583 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 TRAK1Q9UPV9 953 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 AKAP2Q9Y2D5 859 aa6.93□□□□□ -1.3
CTR9-203ENST00000526874 ADAM11O75078 769 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 FBXO24O75426 580 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 WISP1O95388 367 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 ESRRAP11474 423 aaPredicted RBP6.92□□□□□ -1.3
CTR9-203ENST00000526874 SELPP16109 830 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 PCDH1Q08174 1060 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 FAAP100Q0VG06 881 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 ZNF423Q2M1K9 1284 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 FAM117BQ6P1L5 589 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 FBXO11Q86XK2 927 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
CTR9-203ENST00000526874 TM4SF5O14894 197 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 ELNP15502 786 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 ITPKAP23677 461 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 GNA15P30679 374 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 COL19A1Q14993 1142 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 TSNAXIP1Q2TAA8 658 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 CACTIN-AS1Q8N1I8 211 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 AGGF1Q8N302 714 aaeCLIP6.91□□□□□ -1.3
CTR9-203ENST00000526874 TMEM151AQ8N4L1 468 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 UBASH3BQ8TF42 649 aa6.91□□□□□ -1.3
CTR9-203ENST00000526874 PSMD1Q99460 953 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms