RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 KCNH4Q9UQ05 1017 aa8.37□□□□□ -1.07
ATPAF1-208ENST00000526821 PIK3R4Q99570 1358 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 NPC1L1Q9UHC9 1359 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 CNTNAP5Q8WYK1 1306 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 SHISA8B8ZZ34 492 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 EPB42P16452 691 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 PCBP4P57723 403 aaKnown RBP8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 ELOAQ14241 798 aaKnown RBP8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 ANKLE2Q86XL3 938 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 C7orf43Q8WVR3 580 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 POGKQ9P215 609 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 PTCH1Q13635 1447 aa8.36□□□□□ -1.07
ATPAF1-208ENST00000526821 PARD3Q8TEW0 1356 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 ROBO2Q9HCK4 1378 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 LGR5O75473 907 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 TYRO3Q06418 890 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 RALBP1Q15311 655 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 IER5Q5VY09 327 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 WAPLQ7Z5K2 1190 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 BTBD6Q96KE9 485 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 SLC26A8Q96RN1 970 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 STRN4Q9NRL3 753 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 NINLQ9Y2I6 1382 aa8.35□□□□□ -1.07
ATPAF1-208ENST00000526821 XRN1Q8IZH2 1706 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 TGFBR3LH3BV60 316 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 SIN3BO75182 1162 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 WEE1P30291 646 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 KCNQ4P56696 695 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 SPEM2Q0P670 501 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 SFSWAPQ12872 951 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 SAFB2Q14151 953 aaKnown RBP eCLIP8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 C1orf229Q6ZS94 237 aaPredicted RBP8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 BTLAQ7Z6A9 289 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 SYT9Q86SS6 491 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 ALYREFQ86V81 257 aaKnown RBP8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 PBXIP1Q96AQ6 731 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 EFCC1Q9HA90 598 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 ADGRB2O60241 1585 aa8.34□□□□□ -1.07
ATPAF1-208ENST00000526821 NPHP4O75161 1426 aaPredicted RBP8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 ATG7O95352 703 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 CCDC184Q52MB2 194 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 CHSY3Q70JA7 882 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 C14orf37Q86TY3 774 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 ZNF280CQ8ND82 737 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 NOP53Q9NZM5 478 aaKnown RBP8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 AMOTL2Q9Y2J4 779 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 ANKRD36BQ8N2N9 1353 aa8.33□□□□□ -1.08
ATPAF1-208ENST00000526821 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 GNB5O14775 395 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 KCTD17Q8N5Z5 321 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 PNMA5Q96PV4 448 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 SLC12A5Q9H2X9 1139 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 KNSTRNQ9Y448 316 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 USP32Q8NFA0 1604 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 CD163L1Q9NR16 1453 aa8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.32□□□□□ -1.08
ATPAF1-208ENST00000526821 MYBBP1AQ9BQG0 1328 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 GSK3AP49840 483 aa8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 SNRPNP63162 240 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 SRPK2P78362 688 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 ERICH6Q7L0X2 663 aa8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 FCHSD1Q86WN1 690 aa8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 BRD4O60885 1362 aaPredicted RBP8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 CHD2O14647 1828 aaKnown RBP8.31□□□□□ -1.08
ATPAF1-208ENST00000526821 IGHA1P01876 353 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 DGKZQ13574 1117 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 C11orf91Q3C1V1 193 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 BHMTQ93088 406 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 SLC30A3Q99726 388 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 KLF15Q9UIH9 416 aa8.3□□□□□ -1.08
ATPAF1-208ENST00000526821 NSD3Q9BZ95 1437 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 SPDYE3A6NKU9 549 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 ADARB2-AS1A8MUL3 147 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 PRMT3O60678 531 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 KCNA6P17658 529 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 CC2D1BQ5T0F9 858 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 NLRP13Q86W25 1043 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 TMC1Q8TDI8 760 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 MYO19Q96H55 970 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 YTHDC1Q96MU7 727 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 MRS2Q9HD23 443 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 HCN2Q9UL51 889 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 A0A1W2PP64 1363 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 ATP7BP35670 1465 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 LMTK3Q96Q04 1460 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 NWD1Q149M9 1564 aa8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 CPSF1Q10570 1443 aaKnown RBP8.29□□□□□ -1.08
ATPAF1-208ENST00000526821 DGKGP49619 791 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 ARSDP51689 593 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 TNFRSF25Q93038 417 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 KLK14Q9P0G3 267 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 ZMIZ1Q9ULJ6 1067 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 PRR36Q9H6K5 1346 aa8.28□□□□□ -1.08
ATPAF1-208ENST00000526821 NSD2O96028 1365 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 302.4 ms