RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 TAOK1Q7L7X3 1001 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 HVCN1Q96D96 273 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 LRPPRCP42704 1394 aaKnown RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 PPFIA3O75145 1194 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SSRP1Q08945 709 aaKnown RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 TNIP1Q15025 636 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 IFNKQ9P0W0 207 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 CNTRLQ7Z7A1 2325 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 AMPD3Q01432 767 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 IFT20Q8IY31 132 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 MX2P20592 715 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ARID5AQ03989 594 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC26Q8TAB7 109 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SYNCQ9H7C4 482 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 MAP1BP46821 2468 aaKnown RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 BAG2O95816 211 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 PPP2R1AP30153 589 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 UAP1Q16222 522 aaPredicted RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SLC4A8Q2Y0W8 1093 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SLC24A3Q9HC58 644 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ARHGEF12Q9NZN5 1544 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ZSCAN22P10073 491 aaPredicted RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 INPP1P49441 399 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SKOR1P84550 965 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 BCL2L12Q9HB09 334 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 NAIPQ13075 1403 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 PHEXP78562 749 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 PPARDQ03181 441 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 PPP1R21Q6ZMI0 780 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 ERCC5P28715 1186 aaPredicted RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CCT2P78371 535 aaKnown RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CALML4Q96GE6 196 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 RANBP1P43487 201 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 SF3A3Q12874 501 aaKnown RBP eCLIP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 AEBP2Q6ZN18 517 aaPredicted RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 C17orf53Q8N3J3 647 aaPredicted RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 JPH2Q9BR39 696 aaPredicted RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 GPR161Q8N6U8 529 aaKnown RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 IWS1Q96ST2 819 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 EIF2AQ9BY44 585 aaKnown RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 EVA1CP58658 441 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC14Q49A88 953 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC42Q96M95 316 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CRCPO75575 148 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 EEF2P13639 858 aaKnown RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 TSC22D3Q99576 134 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 HMGB2P26583 209 aaKnown RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 CALCOCO2Q13137 446 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 PDCD2Q16342 344 aaPredicted RBP8.66□□□□□ -1.02
LRRK1-205ENST00000526457 INSRP06213 1382 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 POLE2P56282 527 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 PPP4R3AQ6IN85 833 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 C8orf74Q6P047 294 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 PLCB1Q9NQ66 1216 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 SLC4A2P04920 1241 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 GFAPP14136 432 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 RGS22Q8NE09 1264 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 BCAP29Q9UHQ4 241 aa8.66□□□□□ -1.02
LRRK1-205ENST00000526457 ICE2Q659A1 982 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 SCINQ9Y6U3 715 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 PPFIA4O75335 1185 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 TBC1D9Q6ZT07 1266 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 BAG1Q99933 345 aaPredicted RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 TTC21AQ8NDW8 1320 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 CAMSAP2Q08AD1 1489 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 IDEP14735 1019 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 RRAGBQ5VZM2 374 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 KIF6Q6ZMV9 814 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 SYCP3Q8IZU3 236 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 LARP6Q9BRS8 491 aaKnown RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 UTP11Q9Y3A2 253 aaKnown RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 GJC1P36383 396 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 EFCAB13Q8IY85 973 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 SMARCA5O60264 1052 aaPredicted RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 CCT6BQ92526 530 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 ZSCAN16Q9H4T2 348 aaPredicted RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 KIF1CO43896 1103 aaKnown RBP8.65□□□□□ -1.02
LRRK1-205ENST00000526457 FRMD4BQ9Y2L6 1034 aa8.65□□□□□ -1.02
LRRK1-205ENST00000526457 E2F5Q15329 346 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 CARD6Q9BX69 1037 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 IL1RAPL2Q9NP60 686 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 TCP11L1Q9NUJ3 509 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 POLD1P28340 1107 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 GNGT1P63211 74 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 PPANQ9NQ55 473 aaKnown RBP8.65□□□□□ -1.03
LRRK1-205ENST00000526457 ASXL1Q8IXJ9 1541 aa8.65□□□□□ -1.03
LRRK1-205ENST00000526457 CCDC194A0A1B0GVG4 234 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 NUDCD3Q8IVD9 361 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 CENPKQ9BS16 269 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 APOEP02649 317 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 PLCB3Q01970 1234 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 HHATQ5VTY9 493 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 KCNG4Q8TDN1 519 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 HAUS1Q96CS2 278 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 MAN1A2O60476 641 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 UBA7P41226 1012 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 MTHFSP49914 203 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 SLC12A7Q9Y666 1083 aa8.64□□□□□ -1.03
LRRK1-205ENST00000526457 TTF1Q15361 905 aaPredicted RBP8.64□□□□□ -1.03
LRRK1-205ENST00000526457 CNGA4Q8IV77 575 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms