RNA–Protein interactions for RNA: ENST00000526265.5

CCDC90B-206, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,433 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-206ENST00000526265 RGS17Q9UGC6 210 aaPredicted RBP12.87□□□□□ -0.35
CCDC90B-206ENST00000526265 KAT6BQ8WYB5 2073 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 BRWD3Q6RI45 1802 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 LILRA1O75019 489 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 HOXB7P09629 217 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 RASA1P20936 1047 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 GTF2IP78347 998 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 EXOSC9Q06265 439 aaKnown RBP12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 ZNF790Q6PG37 636 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 FAM196AQ6ZSG2 479 aa12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 KLF16Q9BXK1 252 aaPredicted RBP12.86□□□□□ -0.35
CCDC90B-206ENST00000526265 PAPPAQ13219 1627 aa12.85□□□□□ -0.35
CCDC90B-206ENST00000526265 EIF4A1P60842 406 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 ELOAQ14241 798 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 TWISTNBQ3B726 338 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 POTEAQ6S8J7 498 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 OGFOD1Q8N543 542 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 SYTL4Q96C24 671 aaPredicted RBP12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 DNAAF2Q9NVR5 837 aaKnown RBP12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 MIS18AQ9NYP9 233 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 RCAN3Q9UKA8 241 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 PCDHGA11Q9Y5H2 935 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 NHSQ6T4R5 1651 aa12.84□□□□□ -0.35
CCDC90B-206ENST00000526265 UBR2Q8IWV8 1755 aa12.83□□□□□ -0.35
CCDC90B-206ENST00000526265 SBF2Q86WG5 1849 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L15C9J2P7 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L10C9JJH3 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L13C9JLJ4 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L12C9JPN9 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L11C9JVI0 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L21D6R901 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L18D6R9N7 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L22D6RA61 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L17D6RBQ6 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L19D6RCP7 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L20D6RJB6 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 HMGB2P26583 209 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 WDR4P57081 412 aaKnown RBP12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 USP17L24Q0WX57 530 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 ALDH1L2Q3SY69 923 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 LARGE2Q8N3Y3 721 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 OSBPL3Q9H4L5 887 aa12.83□□□□□ -0.36
CCDC90B-206ENST00000526265 CACNA1FO60840 1977 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 TIMP2P16035 220 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 CLDN10P78369 228 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 PTK7Q13308 1070 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 CRTC2Q53ET0 693 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 PIGBQ92521 554 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 ITPKCQ96DU7 683 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 TEX13AQ9BXU3 409 aaPredicted RBP12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 HEG1Q9ULI3 1381 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 RGS12O14924 1447 aa12.82□□□□□ -0.36
CCDC90B-206ENST00000526265 VAMP4O75379 141 aa12.81□□□□□ -0.36
CCDC90B-206ENST00000526265 ZIC2O95409 532 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-206ENST00000526265 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.81□□□□□ -0.36
CCDC90B-206ENST00000526265 HPS1Q92902 700 aa12.81□□□□□ -0.36
CCDC90B-206ENST00000526265 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
CCDC90B-206ENST00000526265 CYP2U1Q7Z449 544 aa12.8□□□□□ -0.36
CCDC90B-206ENST00000526265 C8orf58Q8NAV2 365 aa12.8□□□□□ -0.36
CCDC90B-206ENST00000526265 ACSBG1Q96GR2 724 aa12.8□□□□□ -0.36
CCDC90B-206ENST00000526265 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
CCDC90B-206ENST00000526265 ADD1P35611 737 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 SLC39A6Q13433 755 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 CCDC30Q5VVM6 783 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 SIX5Q8N196 739 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 NRG2O14511 850 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 ZBTB7BO15156 539 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 RARSP54136 660 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 Q6ZVU0 165 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 RETREG2Q8NC44 543 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 ZNF496Q96IT1 587 aaPredicted RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 STK31Q9BXU1 1019 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 ZFAND3Q9H8U3 227 aa12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 NOVA2Q9UNW9 492 aaKnown RBP12.79□□□□□ -0.36
CCDC90B-206ENST00000526265 KCPQ6ZWJ8 1503 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 LAMB4A4D0S4 1761 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 BTAF1O14981 1849 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 FAM187AA6NFU0 413 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 ELL2O00472 640 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 KCNQ3O43525 872 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 ADH1AP07327 375 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 TSPYL6Q8N831 410 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 ZNF594Q96JF6 807 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 CICQ96RK0 1608 aaPredicted RBP12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 ASAP1Q9ULH1 1129 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 KIAA1024Q9UPX6 916 aa12.78□□□□□ -0.36
CCDC90B-206ENST00000526265 ERBB4Q15303 1308 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 KIF16BQ96L93 1317 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 IPO8O15397 1037 aaKnown RBP12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 PDE4CQ08493 712 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 CCDC102BQ68D86 513 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 ANKMY2Q8IV38 441 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 ZMIZ1Q9ULJ6 1067 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 USTQ9Y2C2 406 aa12.77□□□□□ -0.37
CCDC90B-206ENST00000526265 PALLDQ8WX93 1383 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 KCNQ2O43526 872 aa12.76□□□□□ -0.37
CCDC90B-206ENST00000526265 GFRA3O60609 400 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms