RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 SALL4Q9UJQ4 1053 aa7.53□□□□□ -1.2
CSDE1-211ENST00000525970 PAX4O43316 350 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 TGFB1P01137 390 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 PCSK2P16519 638 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 CDC25BP30305 580 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 EIF1AXP47813 144 aaKnown RBP7.52□□□□□ -1.21
CSDE1-211ENST00000525970 DNM1Q05193 864 aaKnown RBP7.52□□□□□ -1.21
CSDE1-211ENST00000525970 CLEC10AQ8IUN9 316 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 KLHDC7BQ96G42 594 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 GOLGA2P5Q9HBQ8 144 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 TMEM63CQ9P1W3 806 aa7.52□□□□□ -1.21
CSDE1-211ENST00000525970 H3BRB1 525 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 IGSF3O75054 1194 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 ADAM11O75078 769 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 ALKBH2Q6NS38 261 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.51□□□□□ -1.21
CSDE1-211ENST00000525970 GLYCTKQ8IVS8 523 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 TRIM42Q8IWZ5 723 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 FAM20CQ8IXL6 584 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 UBASH3BQ8TF42 649 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 PMEPA1Q969W9 287 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 TUT1Q9H6E5 874 aaKnown RBP7.51□□□□□ -1.21
CSDE1-211ENST00000525970 EGFL7Q9UHF1 273 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 HIF3AQ9Y2N7 669 aa7.51□□□□□ -1.21
CSDE1-211ENST00000525970 DDX3YO15523 660 aaKnown RBP7.5□□□□□ -1.21
CSDE1-211ENST00000525970 ICMTO60725 284 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 MED26O95402 600 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 SPINK2P20155 84 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 IRAK1P51617 712 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 TTC16Q8NEE8 873 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 EDEM1Q92611 657 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 FAM83CQ9BQN1 747 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 RNF208Q9H0X6 261 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 CNTN3Q9P232 1028 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 KANSL3Q9P2N6 904 aa7.5□□□□□ -1.21
CSDE1-211ENST00000525970 HMX2A2RU54 273 aa7.49□□□□□ -1.21
CSDE1-211ENST00000525970 NFKBIEO00221 500 aa7.49□□□□□ -1.21
CSDE1-211ENST00000525970 SART1O43290 800 aaKnown RBP7.49□□□□□ -1.21
CSDE1-211ENST00000525970 CES1P23141 567 aa7.49□□□□□ -1.21
CSDE1-211ENST00000525970 DZANK1Q9NVP4 752 aa7.49□□□□□ -1.21
CSDE1-211ENST00000525970 PDE2AO00408 941 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-211ENST00000525970 NPR3P17342 541 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 MZF1P28698 734 aaPredicted RBP7.48□□□□□ -1.21
CSDE1-211ENST00000525970 TXKP42681 527 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 ARL4DP49703 201 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 GP2P55259 537 aaKnown RBP7.48□□□□□ -1.21
CSDE1-211ENST00000525970 C8orf34Q49A92 452 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 KRTAP19-1Q8IUB9 90 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 C1orf127Q8N9H9 656 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 RUSC1Q9BVN2 902 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 SOX13Q9UN79 622 aa7.48□□□□□ -1.21
CSDE1-211ENST00000525970 OAS3Q9Y6K5 1087 aaKnown RBP7.48□□□□□ -1.21
CSDE1-211ENST00000525970 MEGF11A6BM72 1044 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 PRR19A6NJB7 356 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 PDGFAP04085 211 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 BMP3P12645 472 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 PREPP48147 710 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 FDX2Q6P4F2 183 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 BEND4Q6ZU67 534 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 DTX1Q86Y01 620 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 TMEM102Q8N9M5 508 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-211ENST00000525970 FMNL2Q96PY5 1086 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 KIAA1522Q9P206 1035 aaPredicted RBP7.47□□□□□ -1.21
CSDE1-211ENST00000525970 POLIQ9UNA4 740 aa7.47□□□□□ -1.21
CSDE1-211ENST00000525970 C19orf57Q0VDD7 668 aa7.46□□□□□ -1.22
CSDE1-211ENST00000525970 LOC105371045A0A1W2PR82 267 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 ACPPP15309 386 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 NLRP12P59046 1061 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 ECM1Q16610 540 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 GGNBP2Q9H3C7 697 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 KCNF1Q9H3M0 494 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 CCDC87Q9NVE4 849 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 BIN2Q9UBW5 565 aaPredicted RBP7.45□□□□□ -1.22
CSDE1-211ENST00000525970 BRPF3Q9ULD4 1205 aa7.45□□□□□ -1.22
CSDE1-211ENST00000525970 A6NHS1 94 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 BTBD11A6QL63 1104 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 GAS2O43903 313 aaKnown RBP7.44□□□□□ -1.22
CSDE1-211ENST00000525970 FZD6O60353 706 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-211ENST00000525970 ZNF16P17020 682 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-211ENST00000525970 USP5P45974 858 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 NPAS4Q8IUM7 802 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 SLC7A3Q8WY07 619 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 BSNDQ8WZ55 320 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 CHRDQ9H2X0 955 aa7.44□□□□□ -1.22
CSDE1-211ENST00000525970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.44□□□□□ -1.22
CSDE1-211ENST00000525970 WNT11O96014 354 aa7.43□□□□□ -1.22
CSDE1-211ENST00000525970 EDN3P14138 238 aa7.43□□□□□ -1.22
CSDE1-211ENST00000525970 GIMAP7Q8NHV1 300 aa7.43□□□□□ -1.22
CSDE1-211ENST00000525970 NXPE3Q969Y0 559 aa7.43□□□□□ -1.22
CSDE1-211ENST00000525970 SOX17Q9H6I2 414 aaPredicted RBP7.43□□□□□ -1.22
CSDE1-211ENST00000525970 SUGCTQ9HAC7 445 aa7.43□□□□□ -1.22
CSDE1-211ENST00000525970 NDUFB5O43674 189 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 TAL1P17542 331 aaPredicted RBP7.42□□□□□ -1.22
CSDE1-211ENST00000525970 MAP4P27816 1152 aaKnown RBP7.42□□□□□ -1.22
CSDE1-211ENST00000525970 ARHGAP4P98171 946 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 EHHADHQ08426 723 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 IKBKEQ14164 716 aa7.42□□□□□ -1.22
CSDE1-211ENST00000525970 CPSF6Q16630 551 aaKnown RBP eCLIP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms