RNA–Protein interactions for RNA: ENST00000525504.5

CCDC90B-204, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,232 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-204ENST00000525504 PROSER3Q2NL68 480 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 SUSD4Q5VX71 490 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 ZNF385CQ66K41 422 aaPredicted RBP7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 KIF6Q6ZMV9 814 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 KRTAP1-3Q8IUG1 177 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 NGEFQ8N5V2 710 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 NYXQ9GZU5 481 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 TAOK3Q9H2K8 898 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 RRAGCQ9HB90 399 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 KIF13BQ9NQT8 1826 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 KIAA1551Q9HCM1 1747 aa7.78□□□□□ -1.16
CCDC90B-204ENST00000525504 UBR2Q8IWV8 1755 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 IBTKQ9P2D0 1353 aaPredicted RBP7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 SEMA3EO15041 775 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 MYL6BP14649 208 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 WDR43Q15061 677 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 PARP10Q53GL7 1025 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 COPS6Q7L5N1 327 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 CCDC146Q8IYE0 955 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 RTKN2Q8IZC4 609 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 DDX21Q9NR30 783 aaKnown RBP eCLIP7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 UBN2Q6ZU65 1347 aa7.77□□□□□ -1.17
CCDC90B-204ENST00000525504 CHD4Q14839 1912 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 NPHP1O15259 732 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 NTSR2O95665 410 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 EIF2S2P20042 333 aaKnown RBP7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 GTF2E1P29083 439 aaPredicted RBP7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 ZEB1P37275 1124 aaPredicted RBP7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 TCIRG1Q13488 830 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 NEUROD2Q15784 382 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 ERFEQ4G0M1 354 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 CCDC93Q567U6 631 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 NUTM1Q86Y26 1132 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 MPNDQ8N594 471 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 SCARF2Q96GP6 870 aaPredicted RBP7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 CNTNAP3BQ96NU0 1288 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 CRAMP1Q96RY5 1269 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 CNTNAP3Q9BZ76 1288 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 ZBTB3Q9H5J0 574 aa7.76□□□□□ -1.17
CCDC90B-204ENST00000525504 NRXN2Q9P2S2 1712 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 APAF1O14727 1248 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 MSTNO14793 375 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 MAN1A2O60476 641 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 ARHGEF15O94989 841 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 GPTP24298 496 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 FKBP4Q02790 459 aaKnown RBP eCLIP7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 TRIM28Q13263 835 aaKnown RBP7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 KRT24Q2M2I5 525 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 HSP90AB3PQ58FF7 597 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 PPP1R42Q7Z4L9 355 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 SVOPQ8N4V2 548 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 XAGE3Q8WTP9 111 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 PSMD1Q99460 953 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 UTP14AQ9BVJ6 771 aaKnown RBP7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 RNF123Q5XPI4 1314 aa7.75□□□□□ -1.17
CCDC90B-204ENST00000525504 TESPA1A2RU30 521 aaPredicted RBP7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 FAM177BA6PVY3 158 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 FZD9O00144 591 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 ANXA1P04083 346 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 DUSP27Q5VZP5 1158 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 OLFM4Q6UX06 510 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 NLRP10Q86W26 655 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 C16orf71Q8IYS4 520 aaPredicted RBP7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 SYNE4Q8N205 404 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 SMC1BQ8NDV3 1235 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 NLRP3Q96P20 1036 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 ISCA1Q9BUE6 129 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 MBIPQ9NS73 344 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 IFT57Q9NWB7 429 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 RIC1Q4ADV7 1423 aa7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 SIPA1L3O60292 1781 aaPredicted RBP7.74□□□□□ -1.17
CCDC90B-204ENST00000525504 ABCC12Q96J65 1359 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 SNED1Q8TER0 1413 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 BBOX1O75936 387 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 ADH1CP00326 375 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 CCDC27Q2M243 656 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 HDGFL1Q5TGJ6 251 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 PLBD2Q8NHP8 589 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 NLRP7Q8WX94 980 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 VPS33BQ9H267 617 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 ZNF277Q9NRM2 450 aaPredicted RBP7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 HYPKQ9NX55 129 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 CHPF2Q9P2E5 772 aa7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 DBF4Q9UBU7 674 aaPredicted RBP7.73□□□□□ -1.17
CCDC90B-204ENST00000525504 SLURP2P0DP57 97 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 TIMP2P16035 220 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 IARSP41252 1262 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 MARSP56192 900 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 GNAI1P63096 354 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 NNTQ13423 1086 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 CCDC184Q52MB2 194 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 JMYQ8N9B5 988 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 RPGRQ92834 1020 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 RBM17Q96I25 401 aaKnown RBP7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 CHMP4AQ9BY43 222 aa7.72□□□□□ -1.17
CCDC90B-204ENST00000525504 ATP6V0A2Q9Y487 856 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms