RNA–Protein interactions for RNA: ENST00000525078.1

USP47-204, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-204ENST00000525078 GARTP22102 1010 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 GRM5P41594 1212 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 GIPRP48546 466 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 LMNB2Q03252 620 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 CLN3Q13286 438 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 TTF1Q15361 905 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 TRIP4Q15650 581 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 PPP2R5EQ16537 467 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 FOXD4L6Q3SYB3 417 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 LONRF3Q496Y0 759 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 FOXD4L3Q6VB84 417 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 TPTE2Q6XPS3 522 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 C1orf127Q8N9H9 656 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 OR6P1Q8NGX9 317 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 PMEPA1Q969W9 287 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 MFSD3Q96ES6 412 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 CDK15Q96Q40 435 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 ZSCAN10Q96SZ4 725 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 APBA2Q99767 749 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 FAM126AQ9BYI3 521 aaPredicted RBP7.1□□□□□ -1.27
USP47-204ENST00000525078 HRH3Q9Y5N1 445 aa7.1□□□□□ -1.27
USP47-204ENST00000525078 GJB6O95452 261 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 LDHAP00338 332 aaKnown RBP7.09□□□□□ -1.27
USP47-204ENST00000525078 LMNB1P20700 586 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 CES1P23141 567 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 SOX5P35711 763 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 TRIM32Q13049 653 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 NFE2Q16621 373 aaPredicted RBP7.09□□□□□ -1.27
USP47-204ENST00000525078 WWC2Q6AWC2 1192 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 FAM196AQ6ZSG2 479 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 C11orf96Q7Z7L8 435 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 NIM1KQ8IY84 436 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 AIDAQ96BJ3 306 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 SUSD3Q96L08 255 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 FHDC1Q9C0D6 1143 aaPredicted RBP7.09□□□□□ -1.27
USP47-204ENST00000525078 CAAP1Q9H8G2 361 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 PNMA2Q9UL42 364 aa7.09□□□□□ -1.27
USP47-204ENST00000525078 MYL1P05976 194 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 ATF3P18847 181 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 PMLP29590 882 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 STAT3P40763 770 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 CTC1Q2NKJ3 1217 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 SYCP2LQ5T4T6 812 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 KIAA0319Q5VV43 1072 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 SPRYD7Q5W111 196 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 SPATC1Q76KD6 591 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 ZNF295-AS1Q8N0V1 137 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 GLIS3Q8NEA6 775 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 ZSWIM2Q8NEG5 633 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 ATL2Q8NHH9 583 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 CHRDQ9H2X0 955 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 BSDC1Q9NW68 430 aaPredicted RBP7.08□□□□□ -1.28
USP47-204ENST00000525078 ROBO2Q9HCK4 1378 aa7.08□□□□□ -1.28
USP47-204ENST00000525078 IRS4O14654 1257 aaPredicted RBP7.07□□□□□ -1.28
USP47-204ENST00000525078 KCNQ2O43526 872 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 DGAT1O75907 488 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 ADH1AP07327 375 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 PLA2G4AP47712 749 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 ZNF165P49910 485 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 SKOR1P84550 965 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 NBPF1Q3BBV0 1214 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 TM4SF20Q53R12 229 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 TTC39BQ5VTQ0 682 aaPredicted RBP7.07□□□□□ -1.28
USP47-204ENST00000525078 IER5Q5VY09 327 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 THNSL2Q86YJ6 484 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 UBR7Q8N806 425 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 ZNF280CQ8ND82 737 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 RHBDD1Q8TEB9 315 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 PNISRQ8TF01 805 aaKnown RBP7.07□□□□□ -1.28
USP47-204ENST00000525078 ANKRD24Q8TF21 1146 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 NINJ1Q92982 152 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 HSH2DQ96JZ2 352 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 CEP44Q9C0F1 390 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 TNKS2Q9H2K2 1166 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 ABI2Q9NYB9 513 aaPredicted RBP7.07□□□□□ -1.28
USP47-204ENST00000525078 ANKIB1Q9P2G1 1089 aa7.07□□□□□ -1.28
USP47-204ENST00000525078 TMEM238LA0A1B0GVL6 79 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 A0A1W2PP55 124 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 CCDC189A1A4V9 331 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 RASGRP1O95267 797 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 CELA3AP09093 270 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 EDN3P14138 238 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 INPP5BP32019 993 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 PRR20EP86478 221 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 PRR20CP86479 221 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 PRR20DP86480 221 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 PRR20BP86481 221 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 PRR20AP86496 221 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 NR5A1Q13285 461 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 LRRC41Q15345 812 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 ZRSR2Q15696 482 aaKnown RBP7.06□□□□□ -1.28
USP47-204ENST00000525078 CWF19L2Q2TBE0 894 aaKnown RBP7.06□□□□□ -1.28
USP47-204ENST00000525078 GNASQ5JWF2 1037 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 DIEXFQ68CQ4 756 aaKnown RBP7.06□□□□□ -1.28
USP47-204ENST00000525078 TTBK2Q6IQ55 1244 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 LIAT1Q6ZQX7 453 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 ZNF598Q86UK7 904 aaKnown RBP7.06□□□□□ -1.28
USP47-204ENST00000525078 JMYQ8N9B5 988 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 IL17RAQ96F46 866 aa7.06□□□□□ -1.28
USP47-204ENST00000525078 MAF1Q9H063 256 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms