RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 IFIT2P09913 472 aaKnown RBP5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 IL1R1P14778 569 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 ZAP70P43403 619 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 FMR1Q06787 632 aaKnown RBP eCLIP5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 RASGRF1Q13972 1273 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 TNIP1Q15025 636 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 DACT2Q5SW24 774 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 RSBN1LQ6PCB5 846 aaPredicted RBP5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 C15orf52Q6ZUT6 534 aaKnown RBP5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 PODNQ7Z5L7 613 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 GPC2Q8N158 579 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 KIF1BPQ96EK5 621 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 LRRCC1Q9C099 1032 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 LNPKQ9C0E8 428 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 VPS33BQ9H267 617 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 DCTPP1Q9H773 170 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 GPRC5DQ9NZD1 345 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 HMG20BQ9P0W2 317 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 CNOT7Q9UIV1 285 aaKnown RBP5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 FBXO3Q9UK99 471 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 AKAP2Q9Y2D5 859 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 AOX1Q06278 1338 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 KDM2BQ8NHM5 1336 aa5.66□□□□□ -1.5
CHMP4A-202ENST00000524955 UTRNP46939 3433 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 KIF3CO14782 793 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 RAB11FIP3O75154 756 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 CHGBP05060 677 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 VEGFAP15692 232 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 LMOD1P29536 600 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 PRDX5P30044 214 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 EPHX2P34913 555 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 MCAMP43121 646 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 RBM5P52756 815 aaKnown RBP eCLIP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 HIRAP54198 1017 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 HDAC1Q13547 482 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 SLFNL1Q499Z3 407 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 HSP90AB4PQ58FF6 505 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 MFSD14BQ5SR56 506 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 STRIP1Q5VSL9 837 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 ERC1Q8IUD2 1116 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 GMLQ99445 158 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 DNAJC2Q99543 621 aaKnown RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 BOLA2Q9H3K6 86 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 RWDD1Q9H446 243 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 TAF1DQ9H5J8 278 aaPredicted RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 ANTXR1Q9H6X2 564 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 PIH1D3Q9NQM4 214 aaKnown RBP5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 ABCF2Q9UG63 623 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 HACL1Q9UJ83 578 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 CLEC11AQ9Y240 323 aa5.65□□□□□ -1.5
CHMP4A-202ENST00000524955 A0A1B0GUL6 1792 aa5.65□□□□□ -1.51
CHMP4A-202ENST00000524955 CLRN2A0PK11 232 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 H7C1D1 291 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 USP17L8P0C7I0 530 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 CACNB3P54284 484 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 DIXDC1Q155Q3 683 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 KIF4BQ2VIQ3 1234 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 NBPF9Q3BBW0 867 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 CCDC158Q5M9N0 1113 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 PRAMEF18Q5VWM3 479 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 MAP1SQ66K74 1059 aaPredicted RBP5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 SPATA5Q8NB90 893 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 L3MBTL3Q96JM7 780 aaPredicted RBP5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 GPR108Q9NPR9 543 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 GNL3LQ9NVN8 582 aaKnown RBP5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 TTF2Q9UNY4 1162 aaKnown RBP5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 SBF1O95248 1867 aa5.64□□□□□ -1.51
CHMP4A-202ENST00000524955 CCDC88AQ3V6T2 1871 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ADM5C9JUS6 153 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 GOLIM4O00461 696 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 TRAF5O00463 557 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 CYP2E1P05181 493 aaPredicted RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 LDHBP07195 334 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 PDE4AP27815 886 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ARID4AP29374 1257 aaPredicted RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 HTRA3P83110 453 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 CFAP100Q494V2 611 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ANGEL2Q5VTE6 544 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 AGBL3Q8NEM8 1001 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 TDRD3Q9H7E2 651 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 MYOZ2Q9NPC6 264 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ADARB2Q9NS39 739 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 GGA3Q9NZ52 723 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 RAI14Q9P0K7 980 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 LRP2BPQ9P2M1 347 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ZBTB47Q9UFB7 747 aaPredicted RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 DENND2AQ9ULE3 1009 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 SCN9AQ15858 1988 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 FAM205AQ6ZU69 1335 aa5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 ZC3H4Q9UPT8 1303 aaKnown RBP5.63□□□□□ -1.51
CHMP4A-202ENST00000524955 IQCA1LA6NCM1 817 aa5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 WNT10BO00744 389 aa5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 IDH1O75874 414 aaKnown RBP5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 UQCRFS1P1P0C7P4 283 aa5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 RPS12P25398 132 aaKnown RBP5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 CRKP46108 304 aa5.62□□□□□ -1.51
CHMP4A-202ENST00000524955 ZNF280AP59817 542 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms