RNA–Protein interactions for RNA: ENST00000524843.5

CASP4-204, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 978 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-204ENST00000524843 MCAMP43121 646 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 ZAP70P43403 619 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 HMGN5P82970 282 aaKnown RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
CASP4-204ENST00000524843 SLC10A5Q5PT55 438 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 CCDC102BQ68D86 513 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 UBR3Q6ZT12 1888 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 DHX32Q7L7V1 743 aaKnown RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 CCDC83Q8IWF9 413 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 RGS22Q8NE09 1264 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 GTF3C6Q969F1 213 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 GJD4Q96KN9 370 aaPredicted RBP8.84□□□□□ -0.99
CASP4-204ENST00000524843 LMBRD1Q9NUN5 540 aa8.84□□□□□ -0.99
CASP4-204ENST00000524843 M0R2C6 588 aa8.83□□□□□ -1
CASP4-204ENST00000524843 SEMA3EO15041 775 aa8.83□□□□□ -1
CASP4-204ENST00000524843 KCNQ2O43526 872 aa8.83□□□□□ -1
CASP4-204ENST00000524843 GJB2P29033 226 aa8.83□□□□□ -1
CASP4-204ENST00000524843 ZNF445P59923 1031 aa8.83□□□□□ -1
CASP4-204ENST00000524843 MAP3K12Q12852 859 aa8.83□□□□□ -1
CASP4-204ENST00000524843 PKP1Q13835 747 aa8.83□□□□□ -1
CASP4-204ENST00000524843 TOB2Q14106 344 aaPredicted RBP8.83□□□□□ -1
CASP4-204ENST00000524843 UBE4AQ14139 1066 aa8.83□□□□□ -1
CASP4-204ENST00000524843 ME3Q16798 604 aa8.83□□□□□ -1
CASP4-204ENST00000524843 WASHC4Q2M389 1173 aa8.83□□□□□ -1
CASP4-204ENST00000524843 CCDC129Q6ZRS4 1044 aa8.83□□□□□ -1
CASP4-204ENST00000524843 ANKRD18AQ8IVF6 992 aa8.83□□□□□ -1
CASP4-204ENST00000524843 SYNE4Q8N205 404 aa8.83□□□□□ -1
CASP4-204ENST00000524843 CCDC85AQ96PX6 553 aaPredicted RBP8.83□□□□□ -1
CASP4-204ENST00000524843 GNL3LQ9NVN8 582 aaKnown RBP8.83□□□□□ -1
CASP4-204ENST00000524843 CCNL1Q9UK58 526 aaPredicted RBP8.83□□□□□ -1
CASP4-204ENST00000524843 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
CASP4-204ENST00000524843 ZNF804BA4D1E1 1349 aa8.82□□□□□ -1
CASP4-204ENST00000524843 AFF2P51816 1311 aa8.82□□□□□ -1
CASP4-204ENST00000524843 MYH15Q9Y2K3 1946 aa8.82□□□□□ -1
CASP4-204ENST00000524843 RGPD3A6NKT7 1758 aaPredicted RBP8.82□□□□□ -1
CASP4-204ENST00000524843 RGPD4Q7Z3J3 1758 aa8.82□□□□□ -1
CASP4-204ENST00000524843 GPAA1O43292 621 aa8.82□□□□□ -1
CASP4-204ENST00000524843 PFKFB2O60825 505 aa8.82□□□□□ -1
CASP4-204ENST00000524843 ZPR1O75312 459 aa8.82□□□□□ -1
CASP4-204ENST00000524843 LARGE1O95461 756 aa8.82□□□□□ -1
CASP4-204ENST00000524843 HCLS1P14317 486 aaPredicted RBP8.82□□□□□ -1
CASP4-204ENST00000524843 GNAT2P19087 354 aa8.82□□□□□ -1
CASP4-204ENST00000524843 SYT1P21579 422 aa8.82□□□□□ -1
CASP4-204ENST00000524843 FGD1P98174 961 aa8.82□□□□□ -1
CASP4-204ENST00000524843 SCARF1Q14162 830 aa8.82□□□□□ -1
CASP4-204ENST00000524843 ALX1Q15699 326 aa8.82□□□□□ -1
CASP4-204ENST00000524843 OSBP2Q969R2 916 aa8.82□□□□□ -1
CASP4-204ENST00000524843 SEC62Q99442 399 aaKnown RBP8.82□□□□□ -1
CASP4-204ENST00000524843 BSDC1Q9NW68 430 aaPredicted RBP8.82□□□□□ -1
CASP4-204ENST00000524843 TPCN1Q9ULQ1 816 aa8.82□□□□□ -1
CASP4-204ENST00000524843 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
CASP4-204ENST00000524843 PNPLA7Q6ZV29 1317 aa8.81□□□□□ -1
CASP4-204ENST00000524843 MYO5AQ9Y4I1 1855 aaKnown RBP8.81□□□□□ -1
CASP4-204ENST00000524843 E7EWF7 191 aa8.81□□□□□ -1
CASP4-204ENST00000524843 GNPATO15228 680 aa8.81□□□□□ -1
CASP4-204ENST00000524843 CPA1P15085 419 aa8.81□□□□□ -1
CASP4-204ENST00000524843 PDE6AP16499 860 aa8.81□□□□□ -1
CASP4-204ENST00000524843 PHKA1P46020 1223 aa8.81□□□□□ -1
CASP4-204ENST00000524843 EVCP57679 992 aa8.81□□□□□ -1
CASP4-204ENST00000524843 CHRNDQ07001 517 aa8.81□□□□□ -1
CASP4-204ENST00000524843 ST3GAL1Q11201 340 aa8.81□□□□□ -1
CASP4-204ENST00000524843 SLC27A3Q5K4L6 730 aa8.81□□□□□ -1
CASP4-204ENST00000524843 Q6ZUG5 572 aa8.81□□□□□ -1
CASP4-204ENST00000524843 RALYLQ86SE5 291 aaKnown RBP8.81□□□□□ -1
CASP4-204ENST00000524843 SPATA5Q8NB90 893 aa8.81□□□□□ -1
CASP4-204ENST00000524843 NCOA7Q8NI08 942 aa8.81□□□□□ -1
CASP4-204ENST00000524843 ZNF274Q96GC6 653 aaPredicted RBP8.81□□□□□ -1
CASP4-204ENST00000524843 SETDB2Q96T68 719 aa8.81□□□□□ -1
CASP4-204ENST00000524843 MTA3Q9BTC8 594 aa8.81□□□□□ -1
CASP4-204ENST00000524843 BCL11BQ9C0K0 894 aaPredicted RBP8.81□□□□□ -1
CASP4-204ENST00000524843 ANKRD2Q9GZV1 360 aa8.81□□□□□ -1
CASP4-204ENST00000524843 MTMR6Q9Y217 621 aa8.81□□□□□ -1
CASP4-204ENST00000524843 TNRC6CQ9HCJ0 1690 aaKnown RBP8.81□□□□□ -1
CASP4-204ENST00000524843 ELP1O95163 1332 aa8.8□□□□□ -1
CASP4-204ENST00000524843 DHX16O60231 1041 aaKnown RBP8.8□□□□□ -1
CASP4-204ENST00000524843 IDH1O75874 414 aaKnown RBP8.8□□□□□ -1
CASP4-204ENST00000524843 GTF2E1P29083 439 aaPredicted RBP8.8□□□□□ -1
CASP4-204ENST00000524843 MCM5P33992 734 aa8.8□□□□□ -1
CASP4-204ENST00000524843 NT5C2P49902 561 aa8.8□□□□□ -1
CASP4-204ENST00000524843 CLCN6P51797 869 aa8.8□□□□□ -1
CASP4-204ENST00000524843 UBE2HP62256 183 aa8.8□□□□□ -1
CASP4-204ENST00000524843 KRT85P78386 507 aa8.8□□□□□ -1
CASP4-204ENST00000524843 EXOSC10Q01780 885 aaKnown RBP8.8□□□□□ -1
CASP4-204ENST00000524843 TRDNQ13061 729 aa8.8□□□□□ -1
CASP4-204ENST00000524843 RASGRF1Q13972 1273 aa8.8□□□□□ -1
CASP4-204ENST00000524843 ERFEQ4G0M1 354 aa8.8□□□□□ -1
CASP4-204ENST00000524843 SLC9C2Q5TAH2 1124 aa8.8□□□□□ -1
CASP4-204ENST00000524843 TPTE2Q6XPS3 522 aa8.8□□□□□ -1
CASP4-204ENST00000524843 STOX1Q6ZVD7 989 aa8.8□□□□□ -1
CASP4-204ENST00000524843 NBPF5PQ86XG9 351 aaPredicted RBP8.8□□□□□ -1
CASP4-204ENST00000524843 SMARCC2Q8TAQ2 1214 aa8.8□□□□□ -1
CASP4-204ENST00000524843 AIDAQ96BJ3 306 aa8.8□□□□□ -1
CASP4-204ENST00000524843 NLRP3Q96P20 1036 aa8.8□□□□□ -1
CASP4-204ENST00000524843 TSPYL2Q9H2G4 693 aaPredicted RBP8.8□□□□□ -1
CASP4-204ENST00000524843 DENND2AQ9ULE3 1009 aa8.8□□□□□ -1
CASP4-204ENST00000524843 LAMB1P07942 1786 aa8.8□□□□□ -1
CASP4-204ENST00000524843 LRRC37AA6NMS7 1700 aa8.8□□□□□ -1
CASP4-204ENST00000524843 ZNF532Q9HCE3 1301 aa8.8□□□□□ -1
CASP4-204ENST00000524843 CCDC88AQ3V6T2 1871 aa8.79□□□□□ -1
CASP4-204ENST00000524843 NID2Q14112 1375 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms