RNA–Protein interactions for RNA: ENST00000524419.5

LDLRAD3-202, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 5 BASIC

Gene LDLRAD3, Length 1,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-202ENST00000524419 KRT85P78386 507 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 CCDC102BQ68D86 513 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 TTLL5Q6EMB2 1281 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 AGXT2Q9BYV1 514 aa16.25■□□□□ 0.19
LDLRAD3-202ENST00000524419 CASZ1Q86V15 1759 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 MYH15Q9Y2K3 1946 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 GPAA1O43292 621 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 NTSR2O95665 410 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 FGFR2P21802 821 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 PHKA1P46020 1223 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 APOBRQ0VD83 1088 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 SCRN1Q12765 414 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 FAM98CQ17RN3 349 aaKnown RBP16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 PUS7LQ9H0K6 701 aaKnown RBP16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 NOL7Q9UMY1 257 aaKnown RBP16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 FOXP2O15409 715 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 KCNQ2O43526 872 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 FERMT3Q86UX7 667 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 HELBQ8NG08 1087 aaPredicted RBP16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 CHMP4CQ96CF2 233 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
LDLRAD3-202ENST00000524419 IGHMBP2P38935 993 aaKnown RBP16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 VPS72Q15906 364 aa16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 SLC9C2Q5TAH2 1124 aa16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 FAM184AQ8NB25 1140 aa16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 SMARCC2Q8TAQ2 1214 aa16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 KIF3AQ9Y496 699 aa16.23■□□□□ 0.19
LDLRAD3-202ENST00000524419 IDH1O75874 414 aaKnown RBP16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 FGAP02671 866 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 MCM5P33992 734 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 UBE3CQ15386 1083 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 H3BQV1 296 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 HAND2P61296 217 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 HMGN5P82970 282 aaKnown RBP16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 UVSSAQ2YD98 709 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 IFFO2Q5TF58 517 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 FBXL16Q8N461 479 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 DDX11Q96FC9 970 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 C8orf37Q96NL8 207 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 A0A1B0GUL6 1792 aa16.22■□□□□ 0.19
LDLRAD3-202ENST00000524419 ELP1O95163 1332 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 PDE6AP16499 860 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 RXRBP28702 533 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 TPRNQ4KMQ1 711 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 LINC00116Q8NCU8 138 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 NSUN7Q8NE18 718 aaKnown RBP16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 ZNF274Q96GC6 653 aaPredicted RBP16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 NGLY1Q96IV0 654 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
LDLRAD3-202ENST00000524419 BCL9LQ86UU0 1499 aa16.21■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZNF213O14771 459 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 CLEC4GQ6UXB4 293 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 RALYLQ86SE5 291 aaKnown RBP16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 SPATA5Q8NB90 893 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 SCAND2PQ9GZW5 306 aaPredicted RBP16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 CHD4Q14839 1912 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZNF532Q9HCE3 1301 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 BTAF1O14981 1849 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 PTPDC1A2A3K4 754 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZNF500O60304 480 aaPredicted RBP16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 OFD1O75665 1012 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 CHST3Q7LGC8 479 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 NCOA7Q8NI08 942 aa16.2■□□□□ 0.18
LDLRAD3-202ENST00000524419 WDR19Q8NEZ3 1342 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 CNTNAP4Q9C0A0 1308 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 NHSQ6T4R5 1651 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 PRC1O43663 620 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 RESTQ13127 1097 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 MB21D2Q8IYB1 491 aaPredicted RBP16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 RNF214Q8ND24 703 aa16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 CDC5LQ99459 802 aaKnown RBP16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZSCAN16Q9H4T2 348 aaPredicted RBP16.19■□□□□ 0.18
LDLRAD3-202ENST00000524419 CCT2P78371 535 aaKnown RBP16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 RASGRF1Q13972 1273 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 NAA16Q6N069 864 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 TTC6Q86TZ1 520 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 WWC3Q9ULE0 1092 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 ZKSCAN5Q9Y2L8 839 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 TCRBV5S4A2TA0A5A2 114 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 CTDNEP1O95476 244 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 EVCP57679 992 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 MAP3K12Q12852 859 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 FAM173BQ6P4H8 233 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 SPATA32Q96LK8 384 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 THSD7AQ9UPZ6 1657 aa16.18■□□□□ 0.18
LDLRAD3-202ENST00000524419 RGL2O15211 777 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 APPP05067 770 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 TPM2P07951 284 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 NCOA5Q9HCD5 579 aaKnown RBP16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 CHRNDQ07001 517 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 TRDNQ13061 729 aa16.17■□□□□ 0.18
LDLRAD3-202ENST00000524419 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms