RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MRPS27Q92552 414 aaKnown RBP15.06■□□□□ 0
PCDHGB1-201ENST00000523390 RIMBP3CA6NJZ7 1639 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 RIMBP3BA6NNM3 1639 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 RIMBP3Q9UFD9 1639 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 MAP3K15Q6ZN16 1313 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 ZFYVE27Q5T4F4 411 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 COPRSQ9NQ92 184 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 TCP11L1Q9NUJ3 509 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 ZNF532Q9HCE3 1301 aa15.06■□□□□ 0
PCDHGB1-201ENST00000523390 RRP9O43818 475 aaKnown RBP15.06■□□□□ 0
PCDHGB1-201ENST00000523390 TRMT1LQ7Z2T5 733 aaKnown RBP15.06■□□□□ 0
PCDHGB1-201ENST00000523390 TLR7Q9NYK1 1049 aaKnown RBP15.06■□□□□ 0
PCDHGB1-201ENST00000523390 CCDC112Q8NEF3 446 aa15.05■□□□□ 0
PCDHGB1-201ENST00000523390 CUL5Q93034 780 aa15.05■□□□□ 0
PCDHGB1-201ENST00000523390 NOM1Q5C9Z4 860 aaKnown RBP15.05■□□□□ 0
PCDHGB1-201ENST00000523390 SPATA5Q8NB90 893 aa15.05■□□□□ 0
PCDHGB1-201ENST00000523390 GREM2Q9H772 168 aa15.05■□□□□ 0
PCDHGB1-201ENST00000523390 PNPLA6Q8IY17 1366 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 ARHGEF40Q8TER5 1519 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 GIGYF2Q6Y7W6 1299 aaKnown RBP15.05■□□□□ -0
PCDHGB1-201ENST00000523390 OGFOD1Q8N543 542 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 UBA5Q9GZZ9 404 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 PTPRMP28827 1452 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 SPTLC2O15270 562 aa15.05■□□□□ -0
PCDHGB1-201ENST00000523390 DBNLQ9UJU6 430 aaKnown RBP15.05■□□□□ -0
PCDHGB1-201ENST00000523390 CRKLP46109 303 aaKnown RBP15.04■□□□□ -0
PCDHGB1-201ENST00000523390 GNAQP50148 359 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 RPS8P62241 208 aaKnown RBP15.04■□□□□ -0
PCDHGB1-201ENST00000523390 MROH5Q6ZUA9 1318 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 RBM17Q96I25 401 aaKnown RBP15.04■□□□□ -0
PCDHGB1-201ENST00000523390 SAP30BPQ9UHR5 308 aaKnown RBP15.04■□□□□ -0
PCDHGB1-201ENST00000523390 TEX11Q8IYF3 940 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 PIGBQ92521 554 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 NEXMIFQ5QGS0 1516 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 PLCG2P16885 1265 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 OTUD7BQ6GQQ9 843 aa15.04■□□□□ -0
PCDHGB1-201ENST00000523390 CDC42BPGQ6DT37 1551 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 TOP1P11387 765 aaKnown RBP15.03■□□□□ -0
PCDHGB1-201ENST00000523390 AFMP43652 599 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 AATFQ9NY61 560 aaKnown RBP eCLIP15.03■□□□□ -0
PCDHGB1-201ENST00000523390 ANO6Q4KMQ2 910 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 WDR78Q5VTH9 848 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 CPLX3Q8WVH0 158 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 MYL10Q9BUA6 226 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 VEZTQ9HBM0 779 aa15.03■□□□□ -0
PCDHGB1-201ENST00000523390 ANGEL1Q9UNK9 670 aaKnown RBP15.03■□□□□ -0
PCDHGB1-201ENST00000523390 TRIM75PA6NK02 468 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 NAPAP54920 295 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 SYCP1Q15431 976 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 HSP90AA4PQ58FG1 418 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 STAP2Q9UGK3 403 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 GGA1Q9UJY5 639 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 CTDSPL2Q05D32 466 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 CCDC178Q5BJE1 867 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 ODF2Q5BJF6 829 aa15.02■□□□□ -0
PCDHGB1-201ENST00000523390 RTL9Q8NET4 1388 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 HEG1Q9ULI3 1381 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 EPB41L2O43491 1005 aaKnown RBP15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 MYO1BO43795 1136 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 GYG1P46976 350 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 CPSF1Q10570 1443 aaKnown RBP15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 TTLL12Q14166 644 aaPredicted RBP15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 DNAJC25Q9H1X3 360 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 LRRC7Q96NW7 1537 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 ADORA1P30542 326 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 CALML4Q96GE6 196 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 EYA3Q99504 573 aa15.02□□□□□ -0.01
PCDHGB1-201ENST00000523390 DCAF8L1A6NGE4 600 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 JAK2O60674 1132 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 USPL1Q5W0Q7 1092 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 CCDC148Q8NFR7 591 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 PDCL3Q9H2J4 239 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 PTCH1Q13635 1447 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 IL6STP40189 918 aaPredicted RBP15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 TMC6Q7Z403 805 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 CALM1P0DP23 149 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 CALM2P0DP24 149 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 CALM3P0DP25 149 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 HAUS7Q99871 368 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 HDAC9Q9UKV0 1011 aa15.01□□□□□ -0.01
PCDHGB1-201ENST00000523390 BCAMP50895 628 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 TNIP1Q15025 636 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 ARHGAP29Q52LW3 1261 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 RBM26Q5T8P6 1007 aaKnown RBP15□□□□□ -0.01
PCDHGB1-201ENST00000523390 ZMYND15Q9H091 742 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 E7EWF7 191 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 APBA3O96018 575 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 FAM200AQ8TCP9 573 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 TMEM87BQ96K49 555 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 OSBPL3Q9H4L5 887 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 TRMT1Q9NXH9 659 aaKnown RBP15□□□□□ -0.01
PCDHGB1-201ENST00000523390 USP31Q70CQ4 1352 aa15□□□□□ -0.01
PCDHGB1-201ENST00000523390 PHKA1P46020 1223 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 TM6SF1Q9BZW5 370 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 RASEFQ8IZ41 740 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 LUC7LQ9NQ29 371 aaKnown RBP14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 ADAMTS13Q76LX8 1427 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 PDE6AP16499 860 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 ME3Q16798 604 aa14.99□□□□□ -0.01
PCDHGB1-201ENST00000523390 WDR66Q8TBY9 1149 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms