RNA–Protein interactions for RNA: ENST00000523091.5

CHMP7-210, Transcript of charged multivesicular body protein 7, humanhuman

TSL 1 (best)

Gene CHMP7, Length 2,672 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP7-210ENST00000523091 DDB1Q16531 1140 aa17.41■□□□□ 0.38
CHMP7-210ENST00000523091 CCDC102BQ68D86 513 aa17.41■□□□□ 0.38
CHMP7-210ENST00000523091 NKX2-3Q8TAU0 364 aa17.41■□□□□ 0.38
CHMP7-210ENST00000523091 EIF5P55010 431 aaKnown RBP17.4■□□□□ 0.38
CHMP7-210ENST00000523091 PLCB2Q00722 1185 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 SEC31BQ9NQW1 1179 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 CTNNA3Q9UI47 895 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 AKAP11Q9UKA4 1901 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 PTMAP06454 111 aaKnown RBP17.4■□□□□ 0.38
CHMP7-210ENST00000523091 CRKLP46109 303 aaKnown RBP17.4■□□□□ 0.38
CHMP7-210ENST00000523091 MTERF4Q7Z6M4 381 aaKnown RBP17.4■□□□□ 0.38
CHMP7-210ENST00000523091 NUP62CLQ9H1M0 184 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 DOT1LQ8TEK3 1739 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
CHMP7-210ENST00000523091 MYH3P11055 1940 aa17.39■□□□□ 0.38
CHMP7-210ENST00000523091 NUTM2BA6NNL0 878 aaPredicted RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 NUTM2EB1AL46 878 aaPredicted RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 NR1I2O75469 434 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ADD2P35612 726 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 UVSSAQ2YD98 709 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 NUTM2AQ8IVF1 878 aaPredicted RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 MARCH10Q8NA82 808 aaPredicted RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF274Q96GC6 653 aaPredicted RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 CCDC39Q9UFE4 941 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ZKSCAN5Q9Y2L8 839 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 MYO5AQ9Y4I1 1855 aaKnown RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 AP5Z1O43299 807 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 PRC1O43663 620 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ADCY5O95622 1261 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ADD1P35611 737 aaKnown RBP17.39■□□□□ 0.37
CHMP7-210ENST00000523091 ITPK1Q13572 414 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 WWC3Q9ULE0 1092 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 SALL1Q9NSC2 1324 aa17.39■□□□□ 0.37
CHMP7-210ENST00000523091 UQCRHLA0A096LP55 91 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF213O14771 459 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 UQCRHP07919 91 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 FDPSP14324 419 aaKnown RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ANTXR2P58335 489 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 MB21D2Q8IYB1 491 aaPredicted RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 BICD2Q8TD16 824 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 NBPF3Q9H094 633 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ZSCAN16Q9H4T2 348 aaPredicted RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 CCDC87Q9NVE4 849 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF532Q9HCE3 1301 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF500O60304 480 aaPredicted RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 HMGN5P82970 282 aaKnown RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 OTUD7BQ6GQQ9 843 aa17.38■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF830Q96NB3 372 aaPredicted RBP17.38■□□□□ 0.37
CHMP7-210ENST00000523091 MAP3K11Q16584 847 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 LOC102724428A0A0B4J2F2 783 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 KDM4AO75164 1064 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 APPP05067 770 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 SIK1P57059 783 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 TNMDQ9H2S6 317 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
CHMP7-210ENST00000523091 PLCH1Q4KWH8 1693 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 KLF18A0A0U1RQI7 1052 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 MCM5P33992 734 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 NAA16Q6N069 864 aaPredicted RBP17.36■□□□□ 0.37
CHMP7-210ENST00000523091 MYH7P12883 1935 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 PDE6AP16499 860 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 FGFR2P21802 821 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 PUM3Q15397 648 aaKnown RBP17.36■□□□□ 0.37
CHMP7-210ENST00000523091 ILDR1Q86SU0 546 aaPredicted RBP17.36■□□□□ 0.37
CHMP7-210ENST00000523091 NCOA7Q8NI08 942 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 LPIN2Q92539 896 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 GJB4Q9NTQ9 266 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 CARMIL3Q8ND23 1372 aa17.36■□□□□ 0.37
CHMP7-210ENST00000523091 KCNQ2O43526 872 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 RALYLQ86SE5 291 aaKnown RBP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 TBC1D10CQ8IV04 446 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 ZNF512BQ96KM6 892 aaPredicted RBP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 USP28Q96RU2 1077 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 INCENPQ9NQS7 918 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 CFAP45Q9UL16 551 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 HPS5Q9UPZ3 1129 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 MRVI1Q9Y6F6 885 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 CAMTA2O94983 1202 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 ARID4AP29374 1257 aaPredicted RBP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 EVCP57679 992 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 TYRO3Q06418 890 aa17.35■□□□□ 0.37
CHMP7-210ENST00000523091 TTF1Q15361 905 aaPredicted RBP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 UTP14AQ9BVJ6 771 aaKnown RBP17.35■□□□□ 0.37
CHMP7-210ENST00000523091 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.34■□□□□ 0.37
CHMP7-210ENST00000523091 DYNC1I1O14576 645 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 MROH5Q6ZUA9 1318 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 TCRBV5S4A2TA0A5A2 114 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 KCNQ4P56696 695 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 RASGRF1Q13972 1273 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 ZSCAN25Q6NSZ9 544 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 FBXL16Q8N461 479 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 TAOK2Q9UL54 1235 aa17.34■□□□□ 0.37
CHMP7-210ENST00000523091 NIP7Q9Y221 180 aaKnown RBP eCLIP17.34■□□□□ 0.37
CHMP7-210ENST00000523091 CYB5R4Q7L1T6 521 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms